Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1750 ATGGGTGAATTTGGCGTTTCGCTCAAGGAAACTAAAAAAAATAGTGTTGCTGCTGCTACTAGTAATAGTAATGTTCTTGGGTTGGGTAGTGTGAGTAACAAGGTGCAGGTGCAGCAGCAGCAGCATAATAATATTAATATTAATAATAATTATCTTGAAGCATTTCCTAGTAAGACGAGGATGATGATGATGATGATGATGGTGCATCATAATCATCACCACCGTCCATTTGACAGTGATTCATCTGCTTCTGCTCTCGATGGTGATGGTGATGGTCCCACGCTTCAGCACCATTTGTTAACTACTAATCATAATCATAGTATAAACAACGCTGTAGCTGCTAATAGTGGTGTTAATACCGTTGTTGATGATGATGATGATGATGGTGCAGCAGCATCTGTAGAAGAAACAAGACAACCTTTGCAGCAGCCTTTTCACTTTTCTCACTCTCCGTATTATTCTCCTTCTTCTGCTACTACAACTACAACTACAACCACAACCACTACTCGCCATCCCTTCAAATCGCCAGGAACAAGTGGTGGAATGATGGCGGCATCTTTAGGGAGGTTCCCTTTCACAAGTGCTCAATGGAGGGAACTTGAAAGACAAGCTATGATTTACAAGTACATGATGGCTTCTATTCCTGTTCCTCCAGAGCTACTCCTTATGCCTATCGCTGCTGCTTCTCGCTCATCTCCTTTGGAAGGAGGAGGAGGAGGAGGTGGTGGTTTCAATCTGAGGCTTTCAAGCAGTAACAATAATGATGCAGAACCAAATAGGTGCAGGAGAACAGATGGTAAGAAATGGAGATGTTCAAGAGAGGTTGCTCCTAATCACAAGTACTGTGAGCGTCATATGCATAGAGGCCGTCCCCGTTCAAGAAAGCCTGTGGAACTTCACAACAACAACAATAACAATGGACACAATCTACTTAAGAGGGCTCGCCATGATTCTCATCCTTATGCTGCCTCTAGTGCTGCTGTTACTGTCGCATTCTCTAACCACTCTACAAGAAAAGATCCTTCTTCACCTCATTTTCTTGCTTCTGCTACCACCAATCATCATTCATACCTTGAATCTGCTTCTTCCCTTTCTCTTCACAACTTCGGTGCTGGTTCTGTTCCATCAAGTAGGGAGCCCAGGGGGTTGGATTGGATGCTGAATGGAGATCCTATTTCGCTTGGAACATCAGATTCAGAATGGAACACTCTGATGAACAACAACAAAGTTGGATTCAATGCTATGAGTTCCTGCAGCAACACTGAGCCTCAATATATGAACTCATTCCCAGTCTATAGCCCTGGATTGGATCAGCAACACAATAAGCGCTCTCCAACTTTCCTTAACCCTGTTCTGGTTCCTATGGAAACTCTCCAATCTGATAAACCAAGGGTTTTCATCGATGCTTGGTCGAACGCGGCAACGGATCAAGAAACTAATGATGCCGACAACAAGAACTCTGTTTCATCAATTGGGAAACTGTCCCTCTCTTCTCTTGATTTATCAATGGGAGGTGGATATATGCATGAAGAAGTGGGGTTAGGCCTAATGGAAGAGCCAGAGCCGGAAGAGAACAACACAAGCAATGGCACTAAATCTGGCTTCTCGAATTGGCCCACACCACCACCTTGGGTAGCTTCAACCACCACACCTGGTGGTCCACTAGCTGAAGTTCTAATGCCGAGTACAGTCACTTCCACCAATGATGGTGCCGCCGCCACTTCCAATTCGAATCTTTCGTCTCCGGCCACGACAATGGTGTCATCTCCATCTGGGGTATTGCACAAGACACTTGCTTCATTGTCTGATAGCAGTAGCAATAGCAGCCCAAGGGTTCCATCTTCAGGGGCAAATTCTGAAATTGCCTTGCTCAGGTTCAATCAGAAGTAG 1890 0.4471 MGEFGVSLKETKKNSVAAATSNSNVLGLGSVSNKVQVQQQQHNNININNNYLEAFPSKTRMMMMMMMVHHNHHHRPFDSDSSASALDGDGDGPTLQHHLLTTNHNHSINNAVAANSGVNTVVDDDDDDGAAASVEETRQPLQQPFHFSHSPYYSPSSATTTTTTTTTTTRHPFKSPGTSGGMMAASLGRFPFTSAQWRELERQAMIYKYMMASIPVPPELLLMPIAAASRSSPLEGGGGGGGGFNLRLSSSNNNDAEPNRCRRTDGKKWRCSREVAPNHKYCERHMHRGRPRSRKPVELHNNNNNNGHNLLKRARHDSHPYAASSAAVTVAFSNHSTRKDPSSPHFLASATTNHHSYLESASSLSLHNFGAGSVPSSREPRGLDWMLNGDPISLGTSDSEWNTLMNNNKVGFNAMSSCSNTEPQYMNSFPVYSPGLDQQHNKRSPTFLNPVLVPMETLQSDKPRVFIDAWSNAATDQETNDADNKNSVSSIGKLSLSSLDLSMGGGYMHEEVGLGLMEEPEPEENNTSNGTKSGFSNWPTPPPWVASTTTPGGPLAEVLMPSTVTSTNDGAAATSNSNLSSPATTMVSSPSGVLHKTLASLSDSSSNSSPRVPSSGANSEIALLRFNQK* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1750 629 MobiDBLite consensus disorder prediction 234 263 - -
Ahy20g1750 629 MobiDBLite consensus disorder prediction 136 179 - -
Ahy20g1750 629 MobiDBLite consensus disorder prediction 522 543 - -
Ahy20g1750 629 ProSiteProfiles WRC domain profile. 255 299 IPR014977 -
Ahy20g1750 629 ProSiteProfiles QLQ domain profile. 191 226 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy20g1750 629 MobiDBLite consensus disorder prediction 74 96 - -
Ahy20g1750 629 MobiDBLite consensus disorder prediction 519 553 - -
Ahy20g1750 629 PANTHER - 156 618 IPR031137 GO:0005634|GO:0006351|GO:0032502
Ahy20g1750 629 MobiDBLite consensus disorder prediction 136 175 - -
Ahy20g1750 629 Pfam WRC 256 298 IPR014977 -
Ahy20g1750 629 PANTHER GROWTH-REGULATING FACTOR 7 156 618 - -
Ahy20g1750 629 SMART QLQ_2 190 227 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy20g1750 629 MobiDBLite consensus disorder prediction 566 629 - -
Ahy20g1750 629 Pfam QLQ 191 222 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1750 Ahy-Chr20 92642617 92645447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1750 457 607 GRF Transcription Factor Family AT5G53660 37.580 3.53e-12 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Ahy20g1750 WRC 5.80E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1750 - - adu:107469817 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1750 20 92642617 92645447 Ahy10g1349 10 73424818 73427704 hybridization