Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1728 ATGGGTGAAGAATGGAGCTATTGTGAGAAAGTTCGTGCATGGTTCACAAAATCAAAGGCATTTTTGCTAATATTAAGCTTGCAATTTGGGTCAGCGGGCATGTACATTATCACCATGGATGCTCTAAACAAGGGATTGAGTCATTATGTCTTTGTTGTTTATCGTAACGTTGTTGCCACTCTCGCTCTTGGCCCCTTCGCTTTTTTCCTTGAAAGGAAAGTTAGGCCCAAGATGACACCTCGGATATTTGCAGAGATTGTGGCACTGGCTTTTATAGAGATTATACTTGATCAATGCTTCACCTTCCTAGGAATGAAATTAACTTCAGCATCTTTTGCATCTGCTGTGATGAACTCTGTACCCTCCATAACCTTTGTGCTGGCAATCATTTTTAGGTTGGAGCGCATGAACATTAGGAACATAGGATGTCAAGCGAAAGTGACAGGCACTGTGATAAGTCTTGGAGGCGCTATTCTAATGGCAATGTACAAAGGTCCTATTCTTAACATTGTGACGTCATCAACAACCCATGTGGCCCACAATGGGAATAATGCTAACGCCACTGCTGACCAATGGCTCATGGGTGCAATCTTCATTCTAATAGGCTGTGCTGGCTTCTCTGGTTTCTACATATTGCAAGCAATAACATTGAGAAAGTACCCAGCAGAGATGTCCCTAGCCACGTGGGTATGCTTTATTGGTGCAATTCAAAGCAGTGCAGTTACTGCTTACATGGAGCGTGATTCTCCTCAAGTCTGGATTCTGGCTCCTGATTCTAGGCTTCTTGCCTGTTTATATGCGGGAGTAGTAACATCAGCAATACAGTTCTATGTGCAAGGGCTGGTGATTAAAACAACGGGTCCAGTATTTGTGACTGCTTTCAATCCCCTGCGTATGATCATAGTCACAGCCTTCGCTTCCATACTCCTTTCTGAGAAGCTCTACCTAGGAAGTGTTATTGGAGGAGTAGTGGTGGTTGTAGGGCTTTATTTGGTTGTGTGGGGAAAATCTAAAGAAAAGAAAGGCGTAAAACATGCGATGCTGCCACCATCCCCTGAAAAAGAAATCCAACAACAGCAGCTACCAGTTACTGTTCCCAGAAATTTTGATGCCAGCAACAATAATAATAATGATGACGACGATAATAAAATGGATCATCAACTTATGGTTGTGGTTGGAATCAAGAACACCGACGTTGAAGCAAGAAGATCATCATCATGTTAG 1224 0.4281 MGEEWSYCEKVRAWFTKSKAFLLILSLQFGSAGMYIITMDALNKGLSHYVFVVYRNVVATLALGPFAFFLERKVRPKMTPRIFAEIVALAFIEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLERMNIRNIGCQAKVTGTVISLGGAILMAMYKGPILNIVTSSTTHVAHNGNNANATADQWLMGAIFILIGCAGFSGFYILQAITLRKYPAEMSLATWVCFIGAIQSSAVTAYMERDSPQVWILAPDSRLLACLYAGVVTSAIQFYVQGLVIKTTGPVFVTAFNPLRMIIVTAFASILLSEKLYLGSVIGGVVVVVGLYLVVWGKSKEKKGVKHAMLPPSPEKEIQQQQLPVTVPRNFDASNNNNNDDDDNKMDHQLMVVVGIKNTDVEARRSSSC* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1728 407 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020|GO:0016021
Ahy20g1728 407 Pfam EamA-like transporter family 31 160 IPR000620 GO:0016020|GO:0016021
Ahy20g1728 407 PANTHER WAT1-RELATED PROTEIN 15 368 - -
Ahy20g1728 407 PANTHER WAT1-RELATED PROTEIN 15 368 IPR030184 GO:0016021|GO:0022857
Ahy20g1728 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 163 - -
Ahy20g1728 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1728 Ahy-Chr20 86257771 86263023 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1728 19 382 Nodulin-like Gene Family AT2G39510 43.956 7.77e-112 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1728 - - ahf:112715649 753.436