Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1726 ATGGAGGAGCAAAATGGTATGGGGAAGTTGTTGAAAAAGTTGAAGCCATATCTTGCGATGGTTTCGCTTCAGTTTGGGTACTCTGGGATGTATGTCATCACCATGGTTTCTTTCAAACATGGAATGAGTCATTGGGTACTCTCTGTTTACCGTCATGTTATTGCCACACTCATCATGCTTCCCTTTGCTTTTGTCCTTGAAAGGAAAATAAGGCCAAAGATGACTCTGCCAATCTTCCTGAGGTTAGCTGCGCTTGGTTTCCTTGAGCCAGTTCTTGACCAAAATTTGTACAACATGGGTATGAAGAGCACCTCAACAACGTTTGCATCGGCCATTGTTAATGTCCTCCCAGCCATTACTTTTGTTATGGCTCTCATTTTCAGGTTAGAGACAGTGAATTTGAGAAAGATTCACAGCGTAGCGAAGGTAATTGGAACAATGGTGACAGTGTCAGGAGCCATGATCATGACCCTGTACAAAGGACCAGCACTTGAGTTCATAAAGGGACATGGAGGAGGAGCCATCCACCATGATAGTCGTAACGGTTCAAGAACTGAGCCTTCTGAACAAAACTGGGTGATTGGCACACTCATGCTCATTGCAAGTTGTGGTGGTTGGGCTAGCTTCTTTATCTTGCAAGGAGTGGTGTGTTCTGGAATTGCATATTATGTACAAGGAGTTGTGACCAGGGAACGTGGACCAGTTTTTGTGACTTCTTTCAGTCCTCTAATTATGATTATCACTGCTGCATTGGGTACCATTGTCTTGGCTGAGCAAATTCATCTTGGAAGCGTAATTGGAGCTATTGTAATTGTTTGTGGGCTATACACTGTGGTATGGGGGAAAAGCAAAGACAATGTGAATAATACAGAAGCAGTGAAAGTTGAGGGCCAAGAATTGCCAATAAGGGATAGCACAAAATCAGGATCAAACATTTTTGAAAACATTGATGTTAATGTTCCTAGTGAGATAAAATGA 978 0.4254 MEEQNGMGKLLKKLKPYLAMVSLQFGYSGMYVITMVSFKHGMSHWVLSVYRHVIATLIMLPFAFVLERKIRPKMTLPIFLRLAALGFLEPVLDQNLYNMGMKSTSTTFASAIVNVLPAITFVMALIFRLETVNLRKIHSVAKVIGTMVTVSGAMIMTLYKGPALEFIKGHGGGAIHHDSRNGSRTEPSEQNWVIGTLMLIASCGGWASFFILQGVVCSGIAYYVQGVVTRERGPVFVTSFSPLIMIITAALGTIVLAEQIHLGSVIGAIVIVCGLYTVVWGKSKDNVNNTEAVKVEGQELPIRDSTKSGSNIFENIDVNVPSEIK* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1726 325 SUPERFAMILY Multidrug resistance efflux transporter EmrE 193 284 - -
Ahy20g1726 325 Pfam EamA-like transporter family 28 145 IPR000620 GO:0016020|GO:0016021
Ahy20g1726 325 PANTHER WAT1-RELATED PROTEIN 11 214 IPR030184 GO:0016021|GO:0022857
Ahy20g1726 325 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 150 - -
Ahy20g1726 325 PANTHER WAT1-RELATED PROTEIN 213 306 IPR030184 GO:0016021|GO:0022857
Ahy20g1726 325 PANTHER WAT1-RELATED PROTEIN 213 306 - -
Ahy20g1726 325 PANTHER WAT1-RELATED PROTEIN 11 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1726 Ahy-Chr20 85102850 85110486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1726 8 307 Nodulin-like Gene Family AT1G44800 54.520 3.55e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1726 - - gmx:100814921 501.13