Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1716 ATGAGCGATGCACGGAAGACAAAGGAGCAGAAACGCGATAAGGGGGAGAAGGGCGAGTCACTAAGAAAAATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGAATGCAACCTGTACCAACTTATGAAAGACAGGGAGAAGATGTTTTCTGAGGGTGAAGTTAGGAATTGGTGTTTTCAAGTTTTCCAAGGTCTTTCTTATATGCACCAGTGGGGATACTTCCACCGTTATCTGAAGCCTGGTACGTTTATCATTGCATCCGAATCCTTTGTTAAATGTGCTATATGA 333 0.4114 MSDARKTKEQKRDKGEKGESLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKMFSEGEVRNWCFQVFQGLSYMHQWGYFHRYLKPGTFIIASESFVKCAI* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1716 110 Pfam Protein kinase domain 15 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1716 110 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 109 - -
Ahy20g1716 110 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 19 109 - -
Ahy20g1716 110 Gene3D Transferase(Phosphotransferase) domain 1 47 109 - -
Ahy20g1716 110 SUPERFAMILY Protein kinase-like (PK-like) 19 107 IPR011009 -
Ahy20g1716 110 Gene3D Phosphorylase Kinase; domain 1 18 46 - -
Ahy20g1716 110 MobiDBLite consensus disorder prediction 1 22 - -
Ahy20g1716 110 ProSiteProfiles Protein kinase domain profile. 1 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1716 Ahy-Chr20 83422610 83423306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1716 21 109 Core Cell Cycle Gene Families AT1G66750 32.584 5.21e-16 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Ahy20g1716 Pkinase 1.80E-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1716 K08829 - ahf:112785869 228.024