Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1714 ATGGATAATGGTAGCAACACGTTGGACTTTTGTAATCTCAAAGTAGTATCCGCCTTGGGACGTGGTGCCAAGGGCTTGGTTTTCTTGGCGAAAATAAATGAGGGGCAAAATGAGAAGCAATGGCTGGCATTGAAGGTGGTCTCAAAAGCTTTTGTTCGGATGAGAAATAGCAGCCATTGCAAGAGGGTCTCGTTCGAACAACAAATATTGCGTCGTTTTAATCACCCTCTCTTGCCACGGTTGCGAGGGGTCTTAGAAACCGAGGAGCTGTTAGGGTTTGCCATTGACTATTGCCACGGCGGAAACTTACATTCTTTAAGAAGGAAACAATCGGAGAAGACGTTTCCTATTGATGCCATAAGGTTTTATGCTGTGGAATTGGTCCTCGTATTGGACTACTTGCATAGTATTGGAGTAGTGTACAGAGATTTGAAGCCAGAGAACATATTGATTCAAGAAACAGGTCACATAATGCTCGTGGATTTTGATCTCTCCAAGAAGTTGAACCCAAAGTCACCGCAATTGTTGAGTGGCATATCATCACCAAGTTCCGACTCAGCATTACTGGTTGACCGAAGAAAGCGATTGTTACCAGGTTGCTACTGTTGTCACTCGGGTATCATGCCTCTTGACTCAGACAGTCAACTCGGCACTAACTCACCAGCACGGAGCGAGTCCGACTCAGTGGAGAAATCCAACTCATTTGTCGGAACAGAGGATTACGTTGCACCAGAGATTATAACTGGGGAAGGACACAACTTCGGTGTTGATTGGTGGTCCCTCGGTGTTGTTTTGTACGAGATGTCGTATGGAACGACACCGTTTAAGGGCGTAAACAGAAAAGAGACATTTCAACGGATCTTGATGAAACAACCAGATCTATCAGGTGAAAACACACCGTTGAGGGACCTGATCAAGAAGTTACTTGAAAAGCATCCAGACCGTAGGATTGAGGTACATGAAATCAAGTGCCATGATTTCTTTAAGGGTGTGAACTGGAACTCAGTTTTGCAAATTGCTCGTCCACCATATATTCCTCAAAATGACATTGAGGACAAAGCAGGGTTTTCTAGAAAAGACGTAGAGTCGTTTGTTCGTAAAATATTTTTCAAGAATGACAATAAGGAAGAGAAGCCTAAAGAGGTGGAGAAAAAGAAAATTGATGGTGCAAATCAGAATAAGGTTTATAACAAAAATCAAAATACGGTGTGGGTTGACAAATTGACTGACAATCCAACTCAAAACGAAGACTTCTTAATGTTTTGA 1266 0.4273 MDNGSNTLDFCNLKVVSALGRGAKGLVFLAKINEGQNEKQWLALKVVSKAFVRMRNSSHCKRVSFEQQILRRFNHPLLPRLRGVLETEELLGFAIDYCHGGNLHSLRRKQSEKTFPIDAIRFYAVELVLVLDYLHSIGVVYRDLKPENILIQETGHIMLVDFDLSKKLNPKSPQLLSGISSPSSDSALLVDRRKRLLPGCYCCHSGIMPLDSDSQLGTNSPARSESDSVEKSNSFVGTEDYVAPEIITGEGHNFGVDWWSLGVVLYEMSYGTTPFKGVNRKETFQRILMKQPDLSGENTPLRDLIKKLLEKHPDRRIEVHEIKCHDFFKGVNWNSVLQIARPPYIPQNDIEDKAGFSRKDVESFVRKIFFKNDNKEEKPKEVEKKKIDGANQNKVYNKNQNTVWVDKLTDNPTQNEDFLMF* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1714 421 Pfam Protein kinase domain 230 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1714 421 Pfam Protein kinase domain 15 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1714 421 SMART serkin_6 13 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1714 421 PANTHER FLIPPASE KINASE 1-RELATED 6 394 - -
Ahy20g1714 421 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 6 394 - -
Ahy20g1714 421 ProSiteProfiles AGC-kinase C-terminal domain profile. 329 421 IPR000961 GO:0004674|GO:0005524|GO:0006468
Ahy20g1714 421 Gene3D Phosphorylase Kinase; domain 1 14 101 - -
Ahy20g1714 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Ahy20g1714 421 Gene3D Transferase(Phosphotransferase) domain 1 226 364 - -
Ahy20g1714 421 SUPERFAMILY Protein kinase-like (PK-like) 11 357 IPR011009 -
Ahy20g1714 421 MobiDBLite consensus disorder prediction 214 233 - -
Ahy20g1714 421 ProSiteProfiles Protein kinase domain profile. 13 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1714 421 Gene3D Transferase(Phosphotransferase) domain 1 102 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1714 Ahy-Chr20 82540726 82542557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1714 5 421 AGC Kinase Gene Family AT3G25250 51.636 2.61e-139 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Ahy20g1714 Pkinase 3.60E-31 CL0016