LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy20g1692	ATGAATCACTTACCACGATTTTTAGGCCGTAGGAATAATAATAAGAAGCAAGACGGCATGGGCGTGGATCCCAAGAAGGCCCGAATGTCGAAGCCACGTCTCGAGCGCCGCAACGCCGCCAAGCACTTCGATTACGACGCCGGCTCATCGTCTTCGTCGTTCGATGACTACTCCACTTCCTCCTCTTCCGGCGGCGGCGTTTCGGTGCTCTACACGCGCTCGATGGAGTTCTACGATCACAAGAGCTTCAGAATCGAGGGCGTCGAGGGCGAGTTCGACCGGATTTGTCAGAGCCTCGGCCTCTCTGGCCCAGAGGACTTCGCAATTCCCGCGGCGGCTTGGGAGGCCATGAAGGTTCGGTCTTCTTCGGATATTCTTCCGAGGTTGAAGCTTCGCGACTTGGATGAAGTCAAGGAGAGTGAAGAAATTGGGATGAAGGAAGGTCAATTTGGGGATAGTTCCCAACCTAAGGCTCCTAATCCGGTTTCGGTTTCTGATCAATGCGTTCAAGAGATTGCTTGCAGAAGTTGCTTCACTCTCGGTGGTTGCGTTGGCGGAGATGATGGAGTTGAAGTTGGGGATAATTGCGAGGATAGCGTTCCGGTCTGGGCTTCTGATGAATCTGTAAAAGACGGCGGTGATCGCGGAAACTACAACACTACTGTAACTGCTGATAGTGGCCGCAGCAGTGGCAGTGGCAGTGGCGGAGGTATCAAGGGCTTTCGGCCCCCTATGCTGAAACCAGCGCCGGGGAGTAGGGTTTCGGTTGTGGACAACGCGTCCTTCACATGGGACCTGTTGAGGGATTTTGCTCCACAAGGTGAAGGGAAGGAGAATTTCGTGGAATTCAGTGATTCAGATGATGATCATCGAGGATTGCATGGTGAATTAGAGAATAGAGAAAAAGAGGAAGAGGAAGAGGAAGGAGGTAGAGGGGGTGATGGGAAGAAAGAAGAAGAAGAGAATGCATTGAGATTCGCAGAGATTGTTGCGGAGCTTACTGGGTCATGTTCTTTCACAACTTCGAATGGAGATGATTCTTCTAGCACTACCACGGATCCTAGGTCCAATAATATATCTCCTAATGGAAGATTTAAGCGTATTATTACCCACTGGCAGAAGGGTGATCTTTTGGGTCGCGGTTCCTTTGGGTCTGTCTACGAAGGAATTGCAGGGGATGGGTTCTTCTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGAATCAGGGAAAGCAAAGTGTCTATCAATTGGAACAGGAGATTGCACTTTTGAGTCAGTTTCAACATGAGAATATAGTTCAATACTATGGTACAGAAATGGATGACTCAAAGCTGTATATCTTTCTTGAGCTTGTAACCAAAGGTTCTCTTGCAAGCCTCTACCATAGGTATACCCTTCGAGATTCCCAAGTATCTGCATATACCAGACAGATTCTGCACGGCCTAAAGTATCTTCATGATAGAAATGTCATCCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTCAAGCTTGCCGATTTTGGATTGGCAAAGGTTACCTTTTCAGCAACCAAATTGAATGATGTTAAATCAATGAAGGGAACAGCATTTTGGATGGCCCCAGAGGTTGTGAAAGGAAAAGCCCGAGGTTATGGGCTTCCAGCTGATATATGGAGTTTGGGGTGCACTGTGTTGGAGATGTTGACGGGGAAAATCCCATATTCTCACTTGGAATGCATGCAGGCACTGTTTAGAATTGGAAAAGGTGAACCACCTCCGGTACCTGATTCTCTTTCAAGAGATGCAAATGATTTCATCCTGCAGTGCCTAAAAGTGAATCCTGATGATCGTCCCACGGCTACTCAACTCTTAACCCATTCATTTGTCCAACGGTCACTTTCTCAGTCATCTGGCTCTGCATCTCCTTTCATTCCTAGAAGACGGGGTTAA	1950	0.4764	MNHLPRFLGRRNNNKKQDGMGVDPKKARMSKPRLERRNAAKHFDYDAGSSSSSFDDYSTSSSSGGGVSVLYTRSMEFYDHKSFRIEGVEGEFDRICQSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLRDLDEVKESEEIGMKEGQFGDSSQPKAPNPVSVSDQCVQEIACRSCFTLGGCVGGDDGVEVGDNCEDSVPVWASDESVKDGGDRGNYNTTVTADSGRSSGSGSGGGIKGFRPPMLKPAPGSRVSVVDNASFTWDLLRDFAPQGEGKENFVEFSDSDDDHRGLHGELENREKEEEEEEGGRGGDGKKEEEENALRFAEIVAELTGSCSFTTSNGDDSSSTTTDPRSNNISPNGRFKRIITHWQKGDLLGRGSFGSVYEGIAGDGFFFAVKEVSLLDQGNQGKQSVYQLEQEIALLSQFQHENIVQYYGTEMDDSKLYIFLELVTKGSLASLYHRYTLRDSQVSAYTRQILHGLKYLHDRNVIHRDIKCANILVDANGSVKLADFGLAKVTFSATKLNDVKSMKGTAFWMAPEVVKGKARGYGLPADIWSLGCTVLEMLTGKIPYSHLECMQALFRIGKGEPPPVPDSLSRDANDFILQCLKVNPDDRPTATQLLTHSFVQRSLSQSSGSASPFIPRRRG*	650

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy20g1692	649	MobiDBLite	consensus disorder prediction	206	252	-	-
	Ahy20g1692	649	MobiDBLite	consensus disorder prediction	45	64	-	-
	Ahy20g1692	649	PANTHER	MAP KINASE KINASE KINASE-LIKE PROTEIN	78	642	-	-
	Ahy20g1692	649	Gene3D	Transferase(Phosphotransferase) domain 1	370	642	-	-
	Ahy20g1692	649	SUPERFAMILY	Protein kinase-like (PK-like)	349	634	IPR011009	-
	Ahy20g1692	649	SMART	serkin_6	372	629	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy20g1692	649	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	491	503	IPR008271	GO:0004672\|GO:0006468
	Ahy20g1692	649	Pfam	Protein kinase domain	373	629	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy20g1692	649	MobiDBLite	consensus disorder prediction	278	319	-	-
	Ahy20g1692	649	ProSiteProfiles	Protein kinase domain profile.	372	629	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy20g1692	649	MobiDBLite	consensus disorder prediction	337	362	-	-
	Ahy20g1692	649	MobiDBLite	consensus disorder prediction	280	319	-	-
	Ahy20g1692	649	ProSitePatterns	Protein kinases ATP-binding region signature.	378	400	IPR017441	GO:0005524
	Ahy20g1692	649	MobiDBLite	consensus disorder prediction	11	43	-	-
	Ahy20g1692	649	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	78	642	-	-
	Ahy20g1692	649	MobiDBLite	consensus disorder prediction	214	233	-	-
	Ahy20g1692	649	MobiDBLite	consensus disorder prediction	142	162	-	-
	Ahy20g1692	649	MobiDBLite	consensus disorder prediction	1	64	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy20g1692	Ahy-Chr20	76941881	76952090	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy20g1692	33	633	MAP Kinase Kinase Kinase	AT4G08500	51.954	3.49e-171	500

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Ahy20g1692		Pkinase	1.20E-68	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy20g1692	K13414		-	gmx:100819177	690.263