Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1673 ATGGGCAAGATGAAATTTTATAGTGGGGTCATGGGTGTTTCCAACACAAACTACAATTCAAAACTGTTTATCAATGTTGAGTTTTCAGCTGCCAGGAATTTCTTTACGAGGGTGAACAAATTGGATCCTGTTGACAGACAAGGCATAATGCCGCTGGTCTATGATCAACCTATTTCAGTTGAGGAAGATTTTTTGCGTCTGTCAGTCTACAAAACAATTGCCGAGATAAAGGAGCATAATCAGGATACTGTATTTGTTACAGCCGGAACGATTAAAGAAGTTGACACCGAGTTTGGTTGGTGGTACAAAGGATGTAAGAAGTGTCGTCGTGGCTTAAGGGAACTTGAGAAAAGATATTTCTGTCCCAATTGCATTAGAGACTACGGGTTCTATGATCCAAGGTACGACATCCACATAAGGGTGATAGACCACACCGATGCTGCCTCTTTTGTTTTGTTCGATGGAGAAGCTGCAAAGTTTCTTGGAGTTTCTGCTAATGACCTTAGGCAGTCTTGTGTGACTAAGGGTGTTGAGAAAAATTCCTGTCCCGAAGAGATTAATAAGCTTAGGGATATTAAGTTCATCTTCAAAGTACAACTCAAGATGAGGAATCTGAACTCTTATGAACCATATGTGATTCATGTGCTGAGAATGACTAATGAGAATTCTCTGGTCTCTGCTTTCCTGGATAAATACAATCCTGACCTTGGCCTTTTGTCCCATGAAAATTCTGAACTATTGAGTTTGTCTACTGGTCCATACGACACTTCTAAGGCTTGTGAGAGTGAGCTAACTCCATCACCTGCAGTTGATGAGAAACATAATTCTAAGATTCTCGGAGCTAAGAAACATATTGAAGAAGTTGGAGAGGAGTCAGTTTCATCCAAATCCAAGAAAGGAAAGTGGGTTGTGATGGAGGACTAA 924 0.4058 MGKMKFYSGVMGVSNTNYNSKLFINVEFSAARNFFTRVNKLDPVDRQGIMPLVYDQPISVEEDFLRLSVYKTIAEIKEHNQDTVFVTAGTIKEVDTEFGWWYKGCKKCRRGLRELEKRYFCPNCIRDYGFYDPRYDIHIRVIDHTDAASFVLFDGEAAKFLGVSANDLRQSCVTKGVEKNSCPEEINKLRDIKFIFKVQLKMRNLNSYEPYVIHVLRMTNENSLVSAFLDKYNPDLGLLSHENSELLSLSTGPYDTSKACESELTPSPAVDEKHNSKILGAKKHIEEVGEESVSSKSKKGKWVVMED* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1673 307 CDD RPA1_DBD_C 73 206 IPR013955 -
Ahy20g1673 307 SUPERFAMILY Nucleic acid-binding proteins 70 220 IPR012340 -
Ahy20g1673 307 PANTHER REPLICATION FACTOR A 1, RFA1 3 233 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy20g1673 307 Gene3D - 65 231 IPR012340 -
Ahy20g1673 307 PANTHER BNAC07G49340D PROTEIN 3 233 - -
Ahy20g1673 307 Pfam Replication factor-A C terminal domain 85 208 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1673 Ahy-Chr20 73389663 73394642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1673 85 170 Core DNA Replication Machinery Family AT5G61000 32.184 1.48e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1673 - - adu:107477146 560.451