Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1655 ATGAGTAGTATAGATGATAGATGTCCAGTTATACATTTGTATCCTTATCTATGGAGTTTTGTGAGGATTTTGGCCATGCCAAGATTGGATGTTACTGAGGTTGGAAGTGAAGAAATGGATATTTGTTACGAGGTTGGAAGTGAAGAGATGGATCCTGGTCACCAGGTACCGGATCACGATGGCCTTCGGAAAGATGAAATACCTTGTGTTGGAATGCGGTTTGATCAATTGCAAATGGCTCACAAATTCTATGTGACATACGCAAAGAAAGTCGGGTTTGCCACTAAGATACGGACAACAACCTGTGATAAGATCACAAATCAACCCATTAACCAAGCTATTCACTGTAATAGGGATGGGTACCGTGTGTCTCGTGTCAAAGCGTCAACGCGGAAGAACATGATCTCAGTCGCTGGGTGCAAGGCAAGGATATACGTGAAGTTTGACAAGGAGACGCAAGACTGGGTTTTCTTCAAGGTGGAGCTGAGTCACTCGCACCCATGTTCAGCGAGGAAGGCGGTGCACTACCATGAGTATAGGCAGCTGACCATGCATGCGAAGTGCCTGATCGAAGATAATGATGAGGCTGGGATTCGACCAAGCAAGACTTTCCTAGCTTTGGCAAATGAGTCTGGGGGCCCATCTAACCTGGGATACTCAGAAAAGAATTTACGAAACTATATTACAGCTAGGCTCCGAACCAGCAACGTCGACGTCGATGTCAGAGAGATGATGAACTATTTCATGAGAATGCAGGACATCAATCCAAACTTATTCTACGCGGTGAATTTGGACGATCACTGTAAATTTCGGAGTGCAGTATGGGTGGATGCAAGGTATAGGGCGTCGTTCGAATATTATGGAGATGTTGTGTCACTTGATAGCACATACAGCACAAACAAGTATGGATTACCGTTTGCGTCGTTCGTCGGTGTCAACCACCATGGTAAGTCGACCATCCTTGGTTGTGTTCTCCTTGGAAATGAGGAAATCCCAAGTTATGAGTGGGTTTTCCGCCAATGGGTCAAGTGCATGAGAACTGCTCCACAGTGGATCATCACCGATCAGTGCAAATCCATTTTTTGTACCTTTTTGATGATCGACGCATGTGGGTCCCAATATACTTCAAGGGTGAATTTTGGGCTTCCATGA 1152 0.4523 MSSIDDRCPVIHLYPYLWSFVRILAMPRLDVTEVGSEEMDICYEVGSEEMDPGHQVPDHDGLRKDEIPCVGMRFDQLQMAHKFYVTYAKKVGFATKIRTTTCDKITNQPINQAIHCNRDGYRVSRVKASTRKNMISVAGCKARIYVKFDKETQDWVFFKVELSHSHPCSARKAVHYHEYRQLTMHAKCLIEDNDEAGIRPSKTFLALANESGGPSNLGYSEKNLRNYITARLRTSNVDVDVREMMNYFMRMQDINPNLFYAVNLDDHCKFRSAVWVDARYRASFEYYGDVVSLDSTYSTNKYGLPFASFVGVNHHGKSTILGCVLLGNEEIPSYEWVFRQWVKCMRTAPQWIITDQCKSIFCTFLMIDACGSQYTSRVNFGLP* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1655 383 Pfam MULE transposase domain 290 360 IPR018289 -
Ahy20g1655 383 Pfam FAR1 DNA-binding domain 82 168 IPR004330 -
Ahy20g1655 383 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 63 360 - -
Ahy20g1655 383 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 360 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1655 Ahy-Chr20 70192749 70194611 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1655 FAR1 2.80E-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1655 - - adu:107470834 651.358