Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy20g1633 | ATGAAGTATAGACAACGTGTACTTGGTTTGATACTTGTTTCACCTTTATGCAAAGAACCATCTTGGACTGAGTGGTCATGTCAAATTTACTCTATTTTGTGGCATGTGCGGGGTGGCAAAGGAAATGTTGCTGAAGTGGACATTCGAGGTGGTGCTCAATTCCCAGAGTCAGATATAGTTAAAGCTTGCCGAAGGTTAGCTTATAACTTCTCACTGCTCCAGCTCTTCCGTGACGACACTATCCTCATCAAGGGCAAGAAAAGGAGGGATACTGTTTGCATAGCTCTTGCTGATGACACCTGTGAAGAGCCCAAGATCAGGATGAACAAAGTTGTAAGGTCGAATTTGCGGGTTCGTCTTGGAGATGTTGTGTCCGTGCACCAGTGCCCTGATGTGAAGTATGGGAAACGTGTGCACATTCTGCCTATTGATGATACCATTGAAGGTGTCACTGGCAATCTGTTTGATGCTTTCTTCAAACCTTACTTCTTGGAAGCTTATCGTCCTGTCAGAAAAGGAGATCTATTTCTTGTCCATGGAGGGATGAGAAGTGTGGAGTTTAAGGTCATTGAAACTGATCCTGGGGAGTACTGTGTGGTTGCTCCAGATACTGAAATCTTCTGTGAGGGGGAGCCTTTGAAAAGAGAGGATGAAGAGAGGCTGGATGTAGTTGGATATGATGACGTGGGTAGAGTCAGGAAACAAATGGCACAAATTTGTGAGTTGGTAGAGCTTCCCTTGAGGCATCCACAACTCTTTAAGTCGATTGGTGTGAAACCACCCAAAGGTATTCTACTTTATGGACCCCCTGGTTCCGGGAAGACACTGATAGCAAGAGCTGTTGCTAATGAAACGGGAGCTTTCTTCTTTTGTATAAATGGACCGGAGATTATGTCCAAACTGGCAGGAGAGAGTGAAAGCAATCTGAGGAAAGCATTTGAAGAGGCTGAAAAGAATGCACCATCCATCATCTTCATTGATGAAATTGATTCTATTGCACCCAAGAGGGAGAAGACACATGGTGAAGTTGAAAGGAGGATTGTTTCACAGCTTTTGACTCTTATGGATGGATTGAAATCTCGTGCTCATGTTATCGTTATTGGAGCTACAAATCGCCCAAATATCATTGACCCAGCATTGAGAAGGTTCGGTAGATTTGATAGGGAAATTGATATTGGTGTTCCTGATGAAGTTGGCCAACTTAAAGTTCTTCGTATACACACTAAAAACATGAAGCTCTCTGATGATGTTGTGCATGCCATGCTGTGGCTCTGGTTGTAG | 1281 | 0.4372 | MKYRQRVLGLILVSPLCKEPSWTEWSCQIYSILWHVRGGKGNVAEVDIRGGAQFPESDIVKACRRLAYNFSLLQLFRDDTILIKGKKRRDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAFFKPYFLEAYRPVRKGDLFLVHGGMRSVEFKVIETDPGEYCVVAPDTEIFCEGEPLKREDEERLDVVGYDDVGRVRKQMAQICELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNIIDPALRRFGRFDREIDIGVPDEVGQLKVLRIHTKNMKLSDDVVHAMLWLWL* | 427 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy20g1633 | 426 | CDD | AAA | 259 | 393 | - | - | |
Ahy20g1633 | 426 | PANTHER | AAA-FAMILY ATPASE | 70 | 418 | - | - | |
Ahy20g1633 | 426 | Pfam | ATPase family associated with various cellular activities (AAA) | 264 | 393 | IPR003959 | GO:0005524|GO:0016887 | |
Ahy20g1633 | 426 | Gene3D | - | 395 | 417 | - | - | |
Ahy20g1633 | 426 | Gene3D | - | 226 | 394 | IPR027417 | - | |
Ahy20g1633 | 426 | SMART | AAA_5 | 260 | 396 | IPR003593 | - | |
Ahy20g1633 | 426 | Pfam | Cell division protein 48 (CDC48), N-terminal domain | 70 | 130 | IPR003338 | - | |
Ahy20g1633 | 426 | Gene3D | - | 68 | 131 | - | - | |
Ahy20g1633 | 426 | SUPERFAMILY | ADC-like | 71 | 129 | IPR009010 | - | |
Ahy20g1633 | 426 | SMART | CDC48_2_2 | 149 | 215 | IPR004201 | - | |
Ahy20g1633 | 426 | PANTHER | CELL DIVISION CONTROL PROTEIN 48 HOMOLOG E | 70 | 418 | - | - | |
Ahy20g1633 | 426 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 225 | 421 | IPR027417 | - | |
Ahy20g1633 | 426 | ProSitePatterns | AAA-protein family signature. | 364 | 382 | IPR003960 | GO:0005524|GO:0016887 | |
Ahy20g1633 | 426 | Pfam | Cell division protein 48 (CDC48), domain 2 | 151 | 212 | IPR004201 | - | |
Ahy20g1633 | 426 | SUPERFAMILY | Cdc48 domain 2-like | 131 | 222 | IPR029067 | - | |
Ahy20g1633 | 426 | SMART | CDC48_N_2 | 40 | 132 | IPR003338 | - | |
Ahy20g1633 | 426 | Gene3D | - | 132 | 225 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy20g1633 | Ahy-Chr20 | 65597521 | 65601059 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy20g1633 | 224 | 417 | Calmodulin-binding Proteins | AT3G56690 | 48.980 | 3.54e-51 | 183 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy20g1633 | K13525 | - | gmx:100783508 | 657.136 |