Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1633 ATGAAGTATAGACAACGTGTACTTGGTTTGATACTTGTTTCACCTTTATGCAAAGAACCATCTTGGACTGAGTGGTCATGTCAAATTTACTCTATTTTGTGGCATGTGCGGGGTGGCAAAGGAAATGTTGCTGAAGTGGACATTCGAGGTGGTGCTCAATTCCCAGAGTCAGATATAGTTAAAGCTTGCCGAAGGTTAGCTTATAACTTCTCACTGCTCCAGCTCTTCCGTGACGACACTATCCTCATCAAGGGCAAGAAAAGGAGGGATACTGTTTGCATAGCTCTTGCTGATGACACCTGTGAAGAGCCCAAGATCAGGATGAACAAAGTTGTAAGGTCGAATTTGCGGGTTCGTCTTGGAGATGTTGTGTCCGTGCACCAGTGCCCTGATGTGAAGTATGGGAAACGTGTGCACATTCTGCCTATTGATGATACCATTGAAGGTGTCACTGGCAATCTGTTTGATGCTTTCTTCAAACCTTACTTCTTGGAAGCTTATCGTCCTGTCAGAAAAGGAGATCTATTTCTTGTCCATGGAGGGATGAGAAGTGTGGAGTTTAAGGTCATTGAAACTGATCCTGGGGAGTACTGTGTGGTTGCTCCAGATACTGAAATCTTCTGTGAGGGGGAGCCTTTGAAAAGAGAGGATGAAGAGAGGCTGGATGTAGTTGGATATGATGACGTGGGTAGAGTCAGGAAACAAATGGCACAAATTTGTGAGTTGGTAGAGCTTCCCTTGAGGCATCCACAACTCTTTAAGTCGATTGGTGTGAAACCACCCAAAGGTATTCTACTTTATGGACCCCCTGGTTCCGGGAAGACACTGATAGCAAGAGCTGTTGCTAATGAAACGGGAGCTTTCTTCTTTTGTATAAATGGACCGGAGATTATGTCCAAACTGGCAGGAGAGAGTGAAAGCAATCTGAGGAAAGCATTTGAAGAGGCTGAAAAGAATGCACCATCCATCATCTTCATTGATGAAATTGATTCTATTGCACCCAAGAGGGAGAAGACACATGGTGAAGTTGAAAGGAGGATTGTTTCACAGCTTTTGACTCTTATGGATGGATTGAAATCTCGTGCTCATGTTATCGTTATTGGAGCTACAAATCGCCCAAATATCATTGACCCAGCATTGAGAAGGTTCGGTAGATTTGATAGGGAAATTGATATTGGTGTTCCTGATGAAGTTGGCCAACTTAAAGTTCTTCGTATACACACTAAAAACATGAAGCTCTCTGATGATGTTGTGCATGCCATGCTGTGGCTCTGGTTGTAG 1281 0.4372 MKYRQRVLGLILVSPLCKEPSWTEWSCQIYSILWHVRGGKGNVAEVDIRGGAQFPESDIVKACRRLAYNFSLLQLFRDDTILIKGKKRRDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAFFKPYFLEAYRPVRKGDLFLVHGGMRSVEFKVIETDPGEYCVVAPDTEIFCEGEPLKREDEERLDVVGYDDVGRVRKQMAQICELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNIIDPALRRFGRFDREIDIGVPDEVGQLKVLRIHTKNMKLSDDVVHAMLWLWL* 427
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1633 426 CDD AAA 259 393 - -
Ahy20g1633 426 PANTHER AAA-FAMILY ATPASE 70 418 - -
Ahy20g1633 426 Pfam ATPase family associated with various cellular activities (AAA) 264 393 IPR003959 GO:0005524|GO:0016887
Ahy20g1633 426 Gene3D - 395 417 - -
Ahy20g1633 426 Gene3D - 226 394 IPR027417 -
Ahy20g1633 426 SMART AAA_5 260 396 IPR003593 -
Ahy20g1633 426 Pfam Cell division protein 48 (CDC48), N-terminal domain 70 130 IPR003338 -
Ahy20g1633 426 Gene3D - 68 131 - -
Ahy20g1633 426 SUPERFAMILY ADC-like 71 129 IPR009010 -
Ahy20g1633 426 SMART CDC48_2_2 149 215 IPR004201 -
Ahy20g1633 426 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG E 70 418 - -
Ahy20g1633 426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 225 421 IPR027417 -
Ahy20g1633 426 ProSitePatterns AAA-protein family signature. 364 382 IPR003960 GO:0005524|GO:0016887
Ahy20g1633 426 Pfam Cell division protein 48 (CDC48), domain 2 151 212 IPR004201 -
Ahy20g1633 426 SUPERFAMILY Cdc48 domain 2-like 131 222 IPR029067 -
Ahy20g1633 426 SMART CDC48_N_2 40 132 IPR003338 -
Ahy20g1633 426 Gene3D - 132 225 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy20g1633 Ahy-Chr20 65597521 65601059 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1633 224 417 Calmodulin-binding Proteins AT3G56690 48.980 3.54e-51 183
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1633 K13525 - gmx:100783508 657.136