Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1626 ATGTTGTGCTCTCTCTTCTTCTTCTTGTCTTTCTTCTCTCTCAGCTGCTCAACCAACATGCTCTGCTGCCTTCCCTTCTTTTTTGGATTTGCGGTTTTTCTTGGAATGCACTTCCCTCCATTAATGGCTGATTGCCCTTTGGATTTTTCCGCTTCAAACTTTACACTGGCTTCCTCTCTATGTTCTAACCAAGGTGATAGGGGAAACTGTTGCCGCTACATTAATGCTAATGTTGCAATTTCTGTTGCTCGTTTCGCTAATTCAACGAGCATCCTGGGGGTCCCTCCAAATGACTCTGTTTCCTGCCTCCAAACTATATCTGATAAGTTACAACTTAATGGAGTTCCACAAAATGCAACAGCTTTCTGTGGTTTTGGGACCAAAATTCCTGTGAATTATGAATGTAAGGGACGGACTAGTGTCATGCAAATGCTGCAATCTCCTAGATTCGCGGAGGTCACAAAAAATTGCAAAGTGTCACTTGGAGAGGAAAGAAAATGTAGGAAGTGCTTAAATGCAGGCTTTGGTTATCTGCATCATTTGGGAATTAATGATAATATAACACTCAGTACTTGTCGTGATGCAACTTTTGCTGCACTTGCAAGCCAACTTGATCACCAATCTACAACTGACATTGCAAGCTGTTTCTTTGGTGTTCAAGGACTTCTTGGGCCTCCTGTGTCATCGTCCCCATCCTTGCCGAGTCCCGAGGCTTCTCCAAGTCCAGTGGTTGCTGATAGTCCAAGCCAACTATTGTTAGGTGCACCTTTTAAGGGAAACCACCATACATATCACTTGACATTAGTTCCAGGTATTGCTATTGCCGTCACCGCTGTTGCTGTTGGGATGCTCATAGTCTTGATAGTTCTAATTCGTAAAAAAAGCAGAGAGCTAGACGATCCTGATGATTTCGGAAAAACTTCTTCAAAAACCATGCCTCCTTTTGCAACATGGAAGTTTCAGGAAGGTTCTTCAACTATGTTCCGAAAATTTAGCTACAAGGAGATAAAGAAGGCAACAGAGGATTTTAGCACCGTCATCGGGCAAGGGGGATTTGGAACAGTGTATAAAGCTCATTTTAGTGATGGCCTGGTGGCAGCAGTGAAGCGCATGAACAGAGTGTCAGAGCAGGGAGAGGATGAGTTCTGCCGAGAAATCGAACTTCTTGCACGGCTGCACCATCGGCATCTTGTTTCTTTAAGAGGCTTCTGCATAAAAAAACACGAGAGGTTTCTGATGTATGAGTACATGGGAAATGGGAGCTTGAAAGATCATCTTCATTCTCCTGGTAGAACACCACTAAGTTGGCGAACTAGAATCCAAATTGCGATTGACGTAGCTAATGCATTGGAGTACCTTCATTTATATTGTGATCCTCCTCTGTGCCATAGAGACATTAAGTCTAGCAACACTTTGCTGGATGAGAATTTTGTTGCTAAGATAGCCGATTTTGGCCTTGCACAGGCATCAAAAAATGGTTCGATATGCTTTGAACCTCTAAACACTGAAATCCGAGGAACTCCAGGTTATATGGATCCAGAATATGTTGTTACTCAAGAGCTTACCGAGAAAAGCGATATCTACAGTTTCGGGGTGTTACTACTAGAAATCGTGACAGGAAGGCGAGCTATTCAGGATAATAAGAACTTGGTGGAATGGGCGCAACCGTATATGGAATCCGAAACCAGATTATTGGAGTTAGTAGATCCCAACGTGAGGGAGTCTTTTGACTTGGATCAACTCCATACAGTAGTGTCTATAGTAGGATGGTGCACCCAGAGAGAAGGAAGGGCAAGGCCTTCAATAAAACAGGTTCTTCGGCTTCTTTATGAGACGTCAGAACCAATGCACAGTGGTTTCCTACAATCCGGCGATGATGAAGACTGTCAGGGAAGTCAGCAGAGAGGCAGAAGAAGCAAGGGGAAAATGCACCGGAATGAAGCGATTTTCAACAGCGGCGATGGAAGATACCTTGCCTCGTCCTCAAGCACGTCTCGATCGTATTGCAGTAGGACCTTTTTACTCGAGAGTTGCTCTCCGCAGTCGCCGCCAAATATTTTCTCAGTTTAA 2070 0.4401 MLCSLFFFLSFFSLSCSTNMLCCLPFFFGFAVFLGMHFPPLMADCPLDFSASNFTLASSLCSNQGDRGNCCRYINANVAISVARFANSTSILGVPPNDSVSCLQTISDKLQLNGVPQNATAFCGFGTKIPVNYECKGRTSVMQMLQSPRFAEVTKNCKVSLGEERKCRKCLNAGFGYLHHLGINDNITLSTCRDATFAALASQLDHQSTTDIASCFFGVQGLLGPPVSSSPSLPSPEASPSPVVADSPSQLLLGAPFKGNHHTYHLTLVPGIAIAVTAVAVGMLIVLIVLIRKKSRELDDPDDFGKTSSKTMPPFATWKFQEGSSTMFRKFSYKEIKKATEDFSTVIGQGGFGTVYKAHFSDGLVAAVKRMNRVSEQGEDEFCREIELLARLHHRHLVSLRGFCIKKHERFLMYEYMGNGSLKDHLHSPGRTPLSWRTRIQIAIDVANALEYLHLYCDPPLCHRDIKSSNTLLDENFVAKIADFGLAQASKNGSICFEPLNTEIRGTPGYMDPEYVVTQELTEKSDIYSFGVLLLEIVTGRRAIQDNKNLVEWAQPYMESETRLLELVDPNVRESFDLDQLHTVVSIVGWCTQREGRARPSIKQVLRLLYETSEPMHSGFLQSGDDEDCQGSQQRGRRSKGKMHRNEAIFNSGDGRYLASSSSTSRSYCSRTFLLESCSPQSPPNIFSV* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1626 689 SUPERFAMILY Protein kinase-like (PK-like) 321 612 IPR011009 -
Ahy20g1626 689 Gene3D Transferase(Phosphotransferase) domain 1 417 629 - -
Ahy20g1626 689 ProSiteProfiles Protein kinase domain profile. 341 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1626 689 Pfam Protein kinase domain 345 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1626 689 Pfam SPARK 43 181 IPR043891 -
Ahy20g1626 689 PANTHER BNAC06G02630D PROTEIN 29 689 - -
Ahy20g1626 689 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Ahy20g1626 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Ahy20g1626 689 SMART serkin_6 341 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1626 689 CDD STKc_IRAK 347 609 - -
Ahy20g1626 689 MobiDBLite consensus disorder prediction 620 646 - -
Ahy20g1626 689 Gene3D Phosphorylase Kinase; domain 1 310 416 - -
Ahy20g1626 689 PANTHER OS01G0750732 PROTEIN 29 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1626 Ahy-Chr20 63303137 63308494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1626 37 688 Receptor kinase-like Gene Family AT3G19300 60.122 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Ahy20g1626 Pkinase 1.00E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1626 - - ahf:112715638 1315.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1626 20 63303137 63308494 Ahy20g1626 20 63303137 63308494 ECH