Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1597 ATGGCCAGCAACGGAGAGCAGAACCAAACTTCTGAAGCTGGAAGGCACCAAGATGTTGGTCACAAGAGCCTTCTCCAGAGTGATGCTCTATACCAGTACATTCTGGAAACCAGCGTGTACCCAAGAGAACATGAAGCCATGAAAGAATTGAGAGAATTGACAGCAAAGCACCCATGGAACATCATGACAACCTCTGCAGATGAAGGACAATTTTTGAACATGCTCCTTAAGCTCATCAATGCCAAGAACACCATGGAAATCGGTGTCTACACCGGTTACTCGCTTCTTGCCACTGCCCTTGCTCTTCCTGAAGATGGAAAGGAGAAGAACCATGGAAACTACGACTTCATTTTCGTGGACGCAGACAAGGACAACTACCTGAACTACCATAAGAGGCTCATCGATTTGGTGAAGGTAGGTGGTGTGATCGGCTACGACAACACCCTATGGAATGGGTCTGTGGTCGCACCTGCCGATGCACCCATGAGGAAGTACGTTAGGTACTACAGAGATTTTGTGTTGGAGCTTAACAAGGCCTTGGCTGTGGACCCCAGAATTGAGATCTGCATGCTCCCGGTTGGTGATGGAATCACTCTCTGCCGTCGGATCAGCTGA 615 0.4878 MASNGEQNQTSEAGRHQDVGHKSLLQSDALYQYILETSVYPREHEAMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPEDGKEKNHGNYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPADAPMRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITLCRRIS* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1597 204 Gene3D Vaccinia Virus protein VP39 108 204 IPR029063 -
Ahy20g1597 204 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 4 107 - -
Ahy20g1597 204 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 108 204 - -
Ahy20g1597 204 Pfam O-methyltransferase 107 203 IPR002935 GO:0008171
Ahy20g1597 204 Gene3D Vaccinia Virus protein VP39 13 107 IPR029063 -
Ahy20g1597 204 PANTHER O-METHYLTRANSFERASE-RELATED 4 107 - -
Ahy20g1597 204 PANTHER O-METHYLTRANSFERASE-RELATED 108 204 - -
Ahy20g1597 204 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 203 IPR002935 GO:0008171
Ahy20g1597 204 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 202 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1597 Ahy-Chr20 57968801 57971437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1597 4 204 Monolignol Biosynthesis Gene Families AT4G34050 73.878 4.81e-130 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1597 K00588 - gmx:100779260 367.081