Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1593 ATGGCCATGAGTGTTGAGAATCAAGACCCTAATGACATAGGATTCTTTTGGGATAACCAACCATGGGATGTCTCAAATTTTGATAACTTAGGTCAAAGAGAAACCAAAGAGAACCTACATATAGAAATGCCTCCTCTGCCACCAGCTCCTACCAACCACCTCACACAGGGAGAAATAGAGAAGAAAAATGAAGAATTAACGATGCCGGTTACAAGCAACAAGAAGCGACGCCGAGCTGACGAAGATGGCAAGAGGCCTATGAAGAATGATGGTAATGATCATGATCTCCATATATGGACAGAGAGAGAACGAAGGAAGAAAATGAGGGACATGTTTGCTAATCTTCATGCTATGCTTCCTCAACTTCCTCCTAAGGCAGACAAGTCATCCATTGTGGATGAAGCAGTGAGGCACATCAAAACTCTGCAACAAACGGTTGAGAATCTCGAGAAAAAAAAGCGACAGAGGATTCAATCTCTCTCTGTCTCTGTGTCACCAATTGCGTGCGAATCTGCTGTGACCAACCCTCAGTGGAACCCTTACGACTCATCATCCTTGTCAAGAGATAATAATGCATTAACTATAACCGCCACTCAACATGTTTCTGCTGCTGTTGCAAATAATTCACCGTTTTTTAAGACTTGGGCTTCACAGAATGTGGTACTGAACATGTGTGGAGAGGAAGCACAGTTCAGCATATGTGCAGAGAAGAAGCCTAGTCTCTTCACCACCATTGCTTTTGTGCTCCAGAAGCATAAGGTTGACGTCATTTCTGCTAGTATCTTGTGCAATCATAATGTCAATAGATACATGGTCCTTACTCATGCAAGTAGGGCTTTACTTCAATTTGCAGACGCAAATACAGTGGAGGAAACTTTCAAGCGTGCAGCTGAGGAGATTATGATGTGGCTCGGCTAA 918 0.4325 MAMSVENQDPNDIGFFWDNQPWDVSNFDNLGQRETKENLHIEMPPLPPAPTNHLTQGEIEKKNEELTMPVTSNKKRRRADEDGKRPMKNDGNDHDLHIWTERERRKKMRDMFANLHAMLPQLPPKADKSSIVDEAVRHIKTLQQTVENLEKKKRQRIQSLSVSVSPIACESAVTNPQWNPYDSSSLSRDNNALTITATQHVSAAVANNSPFFKTWASQNVVLNMCGEEAQFSICAEKKPSLFTTIAFVLQKHKVDVISASILCNHNVNRYMVLTHASRALLQFADANTVEETFKRAAEEIMMWLG* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1593 305 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 95 163 IPR036638 GO:0046983
Ahy20g1593 305 SMART finulus 100 148 IPR011598 GO:0046983
Ahy20g1593 305 Coils Coil 132 159 - -
Ahy20g1593 305 Pfam Helix-loop-helix DNA-binding domain 100 143 IPR011598 GO:0046983
Ahy20g1593 305 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 92 142 IPR011598 GO:0046983
Ahy20g1593 305 MobiDBLite consensus disorder prediction 61 94 - -
Ahy20g1593 305 PANTHER - 11 303 IPR044278 GO:0003700|GO:0006355|GO:0009960
Ahy20g1593 305 CDD bHLH_AtbHLH_like 97 150 IPR045239 -
Ahy20g1593 305 PANTHER TRANSCRIPTION FACTOR BHLH95 11 303 - -
Ahy20g1593 305 Gene3D - 92 163 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1593 Ahy-Chr20 57185426 57189749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1593 22 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 34.853 4.09e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy20g1593 HLH 1.80E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1593 - - adu:107469983 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1593 20 57185426 57189749 Ahy20g1593 20 57185426 57189749 ECH