Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1582 ATGGAGATTTATACTATGGTCTATTCTGATTTTGGCCTAGCACGTGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAGTGCTACTTCAATCTTATCTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTGTTCTCTCTTCCTCCTCTTTTCCCTGGTGCCAGACTATTTCGTGAACAGTATTGTATGACAAGAAGACTGGAACTAATTTGCTTCAATGGCCAGTGGAAGAAATAG 285 0.4351 MEIYTMVYSDFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELFSLPPLFPGARLFREQYCMTRRLELICFNGQWKK* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1582 94 Gene3D Transferase(Phosphotransferase) domain 1 9 81 - -
Ahy20g1582 94 ProSiteProfiles Protein kinase domain profile. 1 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1582 94 Pfam Protein kinase domain 9 79 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1582 94 SUPERFAMILY Protein kinase-like (PK-like) 9 82 IPR011009 -
Ahy20g1582 94 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 75 - -
Ahy20g1582 94 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 9 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1582 Ahy-Chr20 56004195 56006102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1582 9 69 MAP Kinase Gene Family AT4G11330 57.377 7.13e-20 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Ahy20g1582 Pkinase 3.80E-18 CL0016