Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1556 ATGCACCCAGAAATCGGCGAGGAGAAGAGGAAGAGGAAAACCTTAGAGGAGAAGCCCTCCACCGATTCCGCAATCGAAGCTTCGGAGAAGAAGAGGAGGTACCACGAGTCAATTGAAGAGGAGGAACAAGACTCACACACTCTGTGTGAGCTGCAGCCACTACAGCTTTCACCTCCAGAAGGGTCGGTGCTCCGCCTGCGCTTCCCCCATTTCACGCAAGATGAAATTACAAGAAGGTTGAGAAGATTGGGGAAGGAACCTACGGCGTCATTTACAAGGCTCAAGACCGCGTTACCAACGAGACCATCGCTCTCAAGAAGATTCGCCTTGAGCAGGAGGATGAAGGCATTCTTAGCACTGCAATTCGCGAGATTTCTCTCCTCAAGGAAATGCAGCACAGGAATATTGTTAGATAACTGGAACGTGAAGGCCATCTGCAGAAAGACCACCGGCATTGGCAGGATGAGGTACCTCCGTCACGTGCCTTGCCAATTCAAGAGCAGCTTCAGAGAAGGTACTGAAGCTGCACCAAGGAAGAAGGGAGCAGCTGCATTTGCAGAGACTATACATGGGAATTGTCATCATCTTGGTCAAGCTCTTCTGGAAGAAACCAGAGCAGCATTACAAGTATGA 633 0.5008 MHPEIGEEKRKRKTLEEKPSTDSAIEASEKKRRYHESIEEEEQDSHTLCELQPLQLSPPEGSVLRLRFPHFTQDEITRRLRRLGKEPTASFTRLKTALPTRPSLSRRFALSRRMKAFLALQFARFLSSRKCSTGILLDNWNVKAICRKTTGIGRMRYLRHVPCQFKSSFREGTEAAPRKKGAAAFAETIHGNCHHLGQALLEETRAALQV* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1556 210 Gene3D - 104 178 IPR011331 GO:0003735|GO:0005840|GO:0006412
Ahy20g1556 210 Coils Coil 24 44 - -
Ahy20g1556 210 MobiDBLite consensus disorder prediction 1 46 - -
Ahy20g1556 210 PANTHER 60S RIBOSOMAL PROTEIN L37 133 184 - -
Ahy20g1556 210 PANTHER RIBOSOMAL PROTEIN L37 133 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1556 Ahy-Chr20 49227330 49231199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1556 139 186 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 72.917 9.90e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1556 K02922 - aip:107624163 414.461