Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1539 ATGGCTGAGCTTACTTCAACTCCATCCACTTCTAACAACGCCAATTTATCTTGTTTCCAACTGACGGTTTGCTTGTATGAATGGTGGCTGGTTAAAGCTAAACATGGATTCGAAGGAAAGCAGTTAGCCATTGGAGGCATTGCATCAAAAACAGAAGAATTAGTGCGTGTCTTCACCAGTGCTCCCATTGCGAAACGGCATGATCTGTTCTCTCTTGAGACCACAGATGGGGTTTATATTATCATAAGGGGTTTCATTGACAAGCAGCGCACCATTGATAATGGTTTCCCTCATGAGGTTTTCAATCATTTCTTATTTGGTTTTCCTCAAAACTGGGAAAGTTTTGCAGCAGATTTGATTAGGGATGAATCAACTATTGGCACTAATTTGGGTAGTGCTGTTCCTAAAAATGTATCATCAATTGATCCTGAGATCTTCTCTGCCGGCACAGCTCAAGAAAAATCTATCCTGTCTTCTTCGAAACCTTTAAAGGAAGCATTTGGAGCTCATGGGAAGCCACATGCTGAGGTTGAATGGCATGATTCTATCGCTACATGTGGGGTTAATGCTTCTCAAGGTAGTGGCAGCATTAGATGTGTTACCAGGTTTCATAACATGAAAGTCTGTCAGCAGAAGCAGCTAGCTTCTGGAATTACTCTCAAACATCCAGAGGAACTGAACAGTCCAGTGACACCAGTTCAGTTGCAATCTCTGGAAAAAGTGACTACAGAAAAAGTAAATACACCGTCGGAGCATCTCGATGAAAGCTCTACATCTAGAGTTTCTAGCACTTTATTTGAAAATAAAGAAGACTGTTCTAGGAGAAACAAAGCTACAAGTGAAAAAAGTCAGATCACGTGTGAAAGAAAAAGGACTAAATCTGCCACTGCAACCAAATATCCACGAAAAAGGGGTTTAAGCCCCTCGATCATTGGTGAGAAAGAGAAGATATCCTCAGTGTCTGCTCTATCAAGTTTCAAAAAGTCCAGATCAGGAAGGTTGCTTCTACCACCCCTAGAGTTTTGGCGTAACCAGATACCAATTTACAATGCAGACCATGAGGTTACAGAAATTCAGGGAGGTGCATCTGTGGTTCAATAG 1101 0.416 MAELTSTPSTSNNANLSCFQLTVCLYEWWLVKAKHGFEGKQLAIGGIASKTEELVRVFTSAPIAKRHDLFSLETTDGVYIIIRGFIDKQRTIDNGFPHEVFNHFLFGFPQNWESFAADLIRDESTIGTNLGSAVPKNVSSIDPEIFSAGTAQEKSILSSSKPLKEAFGAHGKPHAEVEWHDSIATCGVNASQGSGSIRCVTRFHNMKVCQQKQLASGITLKHPEELNSPVTPVQLQSLEKVTTEKVNTPSEHLDESSTSRVSSTLFENKEDCSRRNKATSEKSQITCERKRTKSATATKYPRKRGLSPSIIGEKEKISSVSALSSFKKSRSGRLLLPPLEFWRNQIPIYNADHEVTEIQGGASVVQ* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1539 366 Pfam SANTA (SANT Associated) 23 114 IPR015216 -
Ahy20g1539 366 MobiDBLite consensus disorder prediction 267 295 - -
Ahy20g1539 366 PANTHER MIS18-BINDING PROTEIN 1 8 199 IPR039110 -
Ahy20g1539 366 PANTHER MIS18-BINDING PROTEIN 1 229 365 IPR039110 -
Ahy20g1539 366 MobiDBLite consensus disorder prediction 252 266 - -
Ahy20g1539 366 MobiDBLite consensus disorder prediction 245 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1539 Ahy-Chr20 46293919 46303302 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy20g1539 SANTA 1.00E-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1539 - - adu:107480063 402.134