Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1536 ATGGAGTTAGACGAGTATGAGTTACACGAATATGAAATAGAACATGACCATCATGCAGAGACCGATGTCGACAATCGGGATGGGGTTGAATTGGAAGACAATTTAGACGGCGTCGGAGGAATGTATGACAATTTTGTGGATGATGACTTATACGCTATTGATTCTGGCGAATTGATAGGTTCGATTGATTTTGTGAACTTCAGCGAGGAGGAAGTTCGCCGCTTTAATTTCGTAGATGATGATATTGCGTTTGAGTTCTGCCAGCAATATGCAAAGCACCATGGCTTCGGCGTTAGACATTCCAGGAGTGAAAAATGTGGCGAAGTAAGGATACGACAGGAATTCGTGTGCCACCGACAAGGGTACCGATCACCGAAGTTCTACTCAATTCCTAACTGGCAAAAAAGGCCGAGGGCCGAGACACGGTGGGGATGCCCTACAAGGATGCATGTTCGCATGGACGATAAATCAGGACATTGGATGAGCAAAGCGGACATTGAGCAGATGAACGACATGCACAAAGAGGGCATTGGTGTCTCACGAATCCACGATTTCATGGCGATCCTAGTCGGCGGGTATCATAATGTCCCCTACAGAACAAGGGACATTCACAATTACGGCCTAGATGCGGAATCGTGCTTAAGGTATCTCCGAGAGTGCAAGGCAAATGATCCAGCACCGTACTACAAAGAAGTTGTTGACGGGGAGGGCGTGTTACAACATTTGTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTATTTGGAGATGTGGTTGCATTTGATGTAACATACAAGAAAAACGTTTACCTTTCACCTCTGGTAGCCTTCTCTGGTGTGAATCACCACAACCAAATGGTTGTCTTTGCCGCTGCACTTGTAGCCGACGAGCAAGAATAG 903 0.464 MELDEYELHEYEIEHDHHAETDVDNRDGVELEDNLDGVGGMYDNFVDDDLYAIDSGELIGSIDFVNFSEEEVRRFNFVDDDIAFEFCQQYAKHHGFGVRHSRSEKCGEVRIRQEFVCHRQGYRSPKFYSIPNWQKRPRAETRWGCPTRMHVRMDDKSGHWMSKADIEQMNDMHKEGIGVSRIHDFMAILVGGYHNVPYRTRDIHNYGLDAESCLRYLRECKANDPAPYYKEVVDGEGVLQHLFWCDGTSQIDYQVFGDVVAFDVTYKKNVYLSPLVAFSGVNHHNQMVVFAAALVADEQE* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1536 300 Pfam FAR1 DNA-binding domain 85 161 IPR004330 -
Ahy20g1536 300 PANTHER OS02G0262500 PROTEIN 191 299 - -
Ahy20g1536 300 PANTHER OS02G0262500 PROTEIN 77 167 - -
Ahy20g1536 300 Pfam MULE transposase domain 259 300 IPR018289 -
Ahy20g1536 300 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 167 IPR031052 GO:0006355
Ahy20g1536 300 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 191 299 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1536 Ahy-Chr20 45699235 45708041 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1536 FAR1 1.80E-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1536 - - aip:107620767 639.032