Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1534 ATGAAGTTGGTGAAGAGTTCACGAGGTTCCTTGCTTATTAGGTTCTTGCAAGTTCGTTTCCATATCTTTGGTCCCTTTCACATTCACCCAACTCTCATCAATCCTCAACCACTTCTTCTTCTTCTTCATCATCTTCTTGTTCTTGGATTGAGAAAAATGGATCATAGAAGCGGAGGAGGAGGAATGGACATACCCATAATGCATGAGAGTGATCGCTATGAGTTAGTTAGAGATATTGGTTCTGGAAACTTCGGGGTCGCCAGGCTCATGAGGGATAAGCACACCGACCAACTTGTTGCCGTTAAGTATATTGAGAGGGGTGAAAAGATCGATGAAAATGTACAGAGGGAAATTATAAATCACAGGTCACTAAGGCATCCCAATATTGTGAGGTTCAAGGAGGTTATATTGACCCCAACGCATTTGGCTATTGTCATGGAATATGCCTCGGGAGGAGAGCTATTTGAACGAATATGCAATGCAGGGCGCTTTAGTGAGGACGAGGCACGTTTCTTCTTCCAACAACTTATATCTGGGGTTAGCTACTGTCATGCAATGCAAGTGTGTCATCGTGATTTGAAGTTGGAAAATACATTGTTGGATGGTAGTCCAGCTCCTCGCTTGAAGATTTGTGATTTTGGTTATTCAAAGTCTTCAGTGCTACATTCACAACCAAAATCTACAGTTGGCACCCCTGCATACATTGCTCCTGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGATTGCAGATGTGTGGTCTTGTGGGGTAACCTTATATGTGATGTTGGTTGGTGCTTATCCATTTGAGGATCCAGAGGAACCTAAAAATTTCCGCAAAACAATACACAGGATTTTGAATGTCCAATATTCAATTCCTGACTATGTTCATATATCTCCTGAGTGCCGCCATTTGATCTCAAGGATTTTTGTTGCTGATCCTGCACAGAGAATAAGTATACCGGAGATCAAAAACCATGAATGGTTCTTGAAGAATCTACCAGCTGATCTCATGGATGGGGACACAATGAGCAACCAGTATGAGGAGCCTGATCAACCGACGCAAAGCATTGAAGAGATCATGCAGATAATATCCGAGGCCATGATTCCTCCGGCCGGAAGCCAGTCCCTCAACCAGTACCTCACCGGAAGCTTGGACATTGACGATGACATGGATGAGGATCTAGACAGTGATCCTGACCTTGACCTTGATAGCAGTGGAGAAATTGTCTATGCTATGTAA 1242 0.4316 MKLVKSSRGSLLIRFLQVRFHIFGPFHIHPTLINPQPLLLLLHHLLVLGLRKMDHRSGGGGMDIPIMHESDRYELVRDIGSGNFGVARLMRDKHTDQLVAVKYIERGEKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISPECRHLISRIFVADPAQRISIPEIKNHEWFLKNLPADLMDGDTMSNQYEEPDQPTQSIEEIMQIISEAMIPPAGSQSLNQYLTGSLDIDDDMDEDLDSDPDLDLDSSGEIVYAM* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1534 413 SMART serkin_6 73 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1534 413 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 63 408 - -
Ahy20g1534 413 SUPERFAMILY Protein kinase-like (PK-like) 67 371 IPR011009 -
Ahy20g1534 413 Gene3D Transferase(Phosphotransferase) domain 1 149 337 - -
Ahy20g1534 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Ahy20g1534 413 CDD STKc_SnRK2-3 72 328 - -
Ahy20g1534 413 ProSiteProfiles Protein kinase domain profile. 73 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1534 413 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Ahy20g1534 413 Pfam Protein kinase domain 73 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1534 413 PANTHER SERINE/THREONINE KINASE 63 408 - -
Ahy20g1534 413 Gene3D Phosphorylase Kinase; domain 1 53 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1534 Ahy-Chr20 45659228 45663067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1534 66 354 CBL-interacting serine-threonine protein kinases AT4G24400 40.924 2.13e-68 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Ahy20g1534 Pkinase 3.00E-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1534 K14498 - qsu:112032862 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1534 20 45659228 45663067 Ahy20g1534 20 45659228 45663067 ECH