Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1511 ATGGAAGGCGGCGGTCCGAGCCGGCAAGTCGTTGCGGAAGACTTCTTGAGTAGAAATTTTGCTACGGAGGAGGATGCCTATGCTGCCTACAAGGATTTTGCTAGATTAAGGAGTTTTGGCGTTCAGAAGGGAGATGTAGGTTGTGTTAATGGGATTTTGGTAACGAGAAACTTTTTCTGCTATCGACAAGGTATAAGACATCGAAAGCACTATGATCGACCTGAGCGAGTAAGGGAGGAGAGGCTGGAGAGTCGAATGGACTGTAAGGCCAAATTGAAGATTTACTACGATATGCAACAGAGCGTGTGGAAGGTAAGAACCATCATTGACGAACACAACCACGAGCTTGCCCCAGCCATGTTTACACATCTTCTTCCTAGTCATCAGAAGATGAGCGAAGGCAACAGGGCACAGGTGGACAGTTTTAAGCAGTTTGGGATAGCAACCTCCAAAATAATGGCTTACATGGCTGGACAATATGGTGGGTATGGTATGCTTCGATTTACAAAACGAGATTTGTATAATTATGTGCACGGACAAAGGATTACACGAATATGTGATGGGGATGCAGCAGCAACTATTGGTTACTTTGAGGGTAAGGCAAATGCAGACATAATGACAGCGGCACGCTACACACGGACCCCGGATAATCGCCTGGGTAGCCTATTTTGGGCTGATGGCGAGATGATGGCGGATTATCAGCTATTTGGTGATGTGTTGGCGTTTGATTCTATGTATCGTTCTAACAAGTACAGGAAGCCGCTGGTGGTTTTCTCTGGGTCAAATCACCACAAGCAAACATCCAATTTTGAGTTCACGTTGCTGGAGGATGAAGAGGTTCACACTTACCGGTGGTGTTGTTGA 864 0.4618 MEGGGPSRQVVAEDFLSRNFATEEDAYAAYKDFARLRSFGVQKGDVGCVNGILVTRNFFCYRQGIRHRKHYDRPERVREERLESRMDCKAKLKIYYDMQQSVWKVRTIIDEHNHELAPAMFTHLLPSHQKMSEGNRAQVDSFKQFGIATSKIMAYMAGQYGGYGMLRFTKRDLYNYVHGQRITRICDGDAAATIGYFEGKANADIMTAARYTRTPDNRLGSLFWADGEMMADYQLFGDVLAFDSMYRSNKYRKPLVVFSGSNHHKQTSNFEFTLLEDEEVHTYRWCC* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1511 287 Pfam MULE transposase domain 239 286 IPR018289 -
Ahy20g1511 287 Pfam FAR1 DNA-binding domain 30 118 IPR004330 -
Ahy20g1511 287 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 14 285 IPR031052 GO:0006355
Ahy20g1511 287 PANTHER OS02G0262500 PROTEIN 14 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1511 Ahy-Chr20 43496834 43497697 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1511 FAR1 1.60E-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1511 - - aip:107607194 469.159