Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1504 ATGGCATCAACTGACCAATCACCGGCTTTGGAGATATTAGTTCGAACACCCGAAGAGTTATCAATCTGGACTGGACCCCCATTTGCCAATGGTCAACCTGGTGTCAAGCTTGAGAAAGTTAGCTGCGTGAATGCGAAATTCAGCGATGATGGATCGAGACTCATGGTGACGAAATCCAACTCAGTGATTAGCATATATGACTGCAAGAGTGCCAAAGAGATTAGGTCTTTTGAAGTCCCAAACGTCACTTCTGCTATCCTGTCCCCTTGTGGAACCTTTTTGCAAACATTTCAAAAACCTTCGACACCACAAGAGAAGAATGTCATGCTGTGGAAAACGGAGAACGGTGATCCTGTTTATCAACACTCCCAAAAGAACCTGACAAAAACAACTTGGCCTGCTATTCAATTCAGCTCCAATGAGGCCACTGCATGCCGGATGGCAACTAATGAGGTGCAGTTTTTTGACACAAGGGATTTCTCTAAGGGGATCATTGATCGATTAAGAGTTCCTGGAGTTTCTGCCATTGAGCTTTCTAGTGCACCTGGGTCTCATGTAGCTGCATATGTGCCAGAATCCAAGGGAATTCCTGCCTGTGTACAAATATTTCCTAGTGGAAATGCTTCTCAAAGTCAAGCTGTTGCACGACGGAGTTTTTTCCGATGTTCAACAACCCAACTTAAATGGAATCATGGTTCTACTGGTCTTTTAGTGCTGGTGCAGTCAGATGTTGACAAAACTAACCAGAGTTACTATGGGGAATCAAAGTTATTCTATCTAACAATAGATGGAAAGCATGAAGGGCTTGTGCCTCTTTCTAAAGAGGGTCCGGTTCACGATGCTCAGTGGTCATATTCTGGCTTGGAATTTGCTGTAGTATATGGTTTTATGCCTGCTAAAGCAACTTTGTTCGACAAGAAGTGCAATCCTCTGCTGGAGCTTGGAACCGGTCCTTATAACACCATTAGATGGAACCCGAAAGGGAAATTTTTATGTTTGGCTGGCTTTGGCAACTTGCCTGGTGATATGGTATTCTGGGATTACGCAGATAAGAAACAACTTGCAGCAACTAAGGCTGAATGGTCTGTGACAAGTGAATGGTCTCCAGATGGGCGCTATTTCATGACAGCGACAACAGCTCCAAGGCTCCAAGTTGACAATGGGATCAAGATCTTTCACTACAATGGGTCACTGTACTTCAAAAAGATGTTTGACAAGTTGTTCCAGGCTGACTGGAAACCGGAGCCAGCAGATAAGTTTGGTGACATCACCGAATTAATCAAGTCTCTCAATTTGGGTAAAGTCGAAGATAAAAAGCCATCAGGTCCAGGACCAAAATCGTCTCAGGCTTCTAACAAACTCTCTTCTACGAACCCCCCTGCACAAAAGCCTGCCGCATATCGCCCACCACATGCCAAGAACGCTGCTGCAGTTCAGGCTGAGTTGCTTGGAATAGGAGAGAGCAGCCCTGCAGGATCAATGAGCAAGAATGCATTAAGAAACAAGAAGAAGAGGGAGAAGCAAAAGGAGAAAAAGGCTGCTTCGGATGCCAGTTCATAG 1560 0.4487 MASTDQSPALEILVRTPEELSIWTGPPFANGQPGVKLEKVSCVNAKFSDDGSRLMVTKSNSVISIYDCKSAKEIRSFEVPNVTSAILSPCGTFLQTFQKPSTPQEKNVMLWKTENGDPVYQHSQKNLTKTTWPAIQFSSNEATACRMATNEVQFFDTRDFSKGIIDRLRVPGVSAIELSSAPGSHVAAYVPESKGIPACVQIFPSGNASQSQAVARRSFFRCSTTQLKWNHGSTGLLVLVQSDVDKTNQSYYGESKLFYLTIDGKHEGLVPLSKEGPVHDAQWSYSGLEFAVVYGFMPAKATLFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYADKKQLAATKAEWSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLFQADWKPEPADKFGDITELIKSLNLGKVEDKKPSGPGPKSSQASNKLSSTNPPAQKPAAYRPPHAKNAAAVQAELLGIGESSPAGSMSKNALRNKKKREKQKEKKAASDASS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1504 519 MobiDBLite consensus disorder prediction 434 519 - -
Ahy20g1504 519 Gene3D - 196 401 IPR015943 GO:0005515
Ahy20g1504 519 PIRSF Transl_init_eIF2A 4 519 IPR011387 GO:0003743|GO:0006413
Ahy20g1504 519 Gene3D - 25 189 IPR015943 GO:0005515
Ahy20g1504 519 SUPERFAMILY DPP6 N-terminal domain-like 42 395 - -
Ahy20g1504 519 Coils Coil 496 516 - -
Ahy20g1504 519 MobiDBLite consensus disorder prediction 444 462 - -
Ahy20g1504 519 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 10 516 IPR011387 GO:0003743|GO:0006413
Ahy20g1504 519 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1504 Ahy-Chr20 43137979 43143534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1504 131 417 Eukaryotic Initiation Factors Gene Family AT5G25780 24.522 1.02e-21 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1504 K15026 - gmx:100811589 874.004