Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1493 ATGGGAAAGAAGGGTAGTTGGTTTTCTGCAATAAAGAGGGTTTTCACACACCACTCCAAGGAGAAGCAAGTACCTAATGATTCGGAGAACAAAAGCTCGAAAGATAAGAAGAAGAAAGGCCTAGGAAAACTAAGGCATGGAGAGACCAATTCATTCATCCCCCTCTTCAGAGAGCCAAGCAGCATTGAGAAAATCTTTGGCGACTTTGAAAGAGAGCAACAATTACTATCTGTAAGGCCTCCAACGCCTCTCGAGCAACCAAAACCAGCCCCTGTTGTCCCTCCTAGAGCTGCTTCTCCAAGGGCTCCTTCTCCGAGGGCTCCATCTCCAAGAGCTGCGTCTCCGAAGGCTCCTTCTCCGCGTGCTACCTCTCCCAAAGCTACTTCTTCCAGGGTTGTTCATCACCACAAGGAGGTTGGCTATAGACCGGAACCAACTTTAAGGAACCAACATGCCGCGGCATCTAAGATCCAGGCTGTTTATAGAGGCTATATGGCCAGGAGGAGTTTTAGAGCTCTGAAGGGATTGGTGAGGCTTCAAGGCGTGGTAAGAGGACAGAATGTGAAGAGACAGACGGTTAATGCCATGAAACATATGCAGCTGTTGGTGCGAGTTCAGTCTCAAATTCAGTCTCGAAGGATTCAGATGCTGGAAAATCAGGCGCGATATCAAGCCGAGTTAAGGAATGACAAGGATGTTGCTAGCACCTTGGGCAAATTGACTTCTGAGAATGAAGAATGGGATGATAGCTTACTGACAAAAGAGGAAATAGAGGCAAGATTACAGAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATACTCTCATCAGTTATGGAAATCCACTCCGAAATCATCTTCGACGCCGGTGACAGACTTGCGATCCGGCCCATGGTGGTGGAACTGGTTGGAGAGACAAATGCCAGCCTCATCAAATCCACAAGAGAAACAATCCCTCAAGAACTTCCAAATCACACCTCCAAGACCATACTCAGAACAAAAGACTAGTCCTAAACCCGCCTCGACCAGCACCCCTCGGCAGCATCATTTCGCCTTCGACAACATGGACATACCAACGCCAAAATCCACCAAATCAACCATACTCCCATCCTCAAAACCTTCTAGAACTCCACCATACAGAACTCCACAACCACCAATCATGTCAAAGTATTCAAGAGCCTTCGACGTGGCGCTGAAGGACGACGATAGCCTAACAAGTTGTCCACCATTTTCTGTGCCGAATTACATGGCTCCAACTGTTTCTGCCAAGGCCAAAGTTCGCGCCAATAGCAATCCAAGAGAAAGGTTTGGTGGTGTTGGAACTCCAACAAGTGATTCAAAGAGAAGACTCTCATTCCCTTTCACACAAGGGAACATGAGTGTGGATTCAACTGTTTCTTTGCCTGCTACCATGGGGAGAAAGCCTTTTACAAGATTTGTGTGA 1458 0.4719 MGKKGSWFSAIKRVFTHHSKEKQVPNDSENKSSKDKKKKGLGKLRHGETNSFIPLFREPSSIEKIFGDFEREQQLLSVRPPTPLEQPKPAPVVPPRAASPRAPSPRAPSPRAASPKAPSPRATSPKATSSRVVHHHKEVGYRPEPTLRNQHAAASKIQAVYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAELRNDKDVASTLGKLTSENEEWDDSLLTKEEIEARLQRKVEAIIKRERAMAFAYSHQLWKSTPKSSSTPVTDLRSGPWWWNWLERQMPASSNPQEKQSLKNFQITPPRPYSEQKTSPKPASTSTPRQHHFAFDNMDIPTPKSTKSTILPSSKPSRTPPYRTPQPPIMSKYSRAFDVALKDDDSLTSCPPFSVPNYMAPTVSAKAKVRANSNPRERFGGVGTPTSDSKRRLSFPFTQGNMSVDSTVSLPATMGRKPFTRFV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1493 485 MobiDBLite consensus disorder prediction 434 455 - -
Ahy20g1493 485 ProSiteProfiles IQ motif profile. 150 178 IPR000048 GO:0005515
Ahy20g1493 485 MobiDBLite consensus disorder prediction 14 36 - -
Ahy20g1493 485 MobiDBLite consensus disorder prediction 329 354 - -
Ahy20g1493 485 PANTHER IQ-DOMAIN 5-RELATED 1 460 - -
Ahy20g1493 485 MobiDBLite consensus disorder prediction 329 391 - -
Ahy20g1493 485 Gene3D - 148 201 - -
Ahy20g1493 485 PANTHER IQ-DOMAIN 13 1 460 - -
Ahy20g1493 485 MobiDBLite consensus disorder prediction 1 56 - -
Ahy20g1493 485 MobiDBLite consensus disorder prediction 79 135 - -
Ahy20g1493 485 SMART iq_5 149 171 IPR000048 GO:0005515
Ahy20g1493 485 MobiDBLite consensus disorder prediction 363 379 - -
Ahy20g1493 485 Pfam Protein of unknown function (DUF4005) 366 464 IPR025064 -
Ahy20g1493 485 MobiDBLite consensus disorder prediction 82 115 - -
Ahy20g1493 485 Pfam IQ calmodulin-binding motif 151 171 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1493 Ahy-Chr20 42539390 42544187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1493 1 484 IQD Protein Family AT3G59690 49.458 8.89e-147 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1493 - - lang:109331805 658.677