Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1474 ATGCAGCAGCCCCTTGAAGCACATTGGAAGGTGGTTAAGCGCATTTTGCGGTACATCAGTGGCACTACTAGCTTTGGTTTGCGGATTCATCCGGCTAAAGAGCTCACTCTCACAGTTTATACCAATTTTGATTGGGGGTCTGATCCTGATGATCGAAAATCAACCAATGGTTATTGTAAAGAGACCTGCAACAGCTATGGAAGAGAAGGAGGTTGTCCATGGAACCCAGAAGAACGCAAGCTATTTTTGAAGGGAGTTGAAAAATATGGTAAAGGAAAGTGGAAAAGAATATCTCGCGAGTTTGTACCGTCGAAGACTCCAAAGCAAGTTGCCAGCCATGCTCAAAAGTACTTTTTAAAACAAGAAGAATCTGAAGAGAACACTAATAAAAGAAGGTGCAATAATATCCATGATATGAATAATGCTTCCAATGTTGGAGAAACTGAACCATTGACCATTAGGGAGCCACAACTGCAACATGGTACCATTGATCAGCACAATGATGTAGAGCCAATAATAAGTTTGGGGAGTGCCAACAATAATCAATTTGAGGTCATTCCGAATTCTGGTAATTTGCATAGCGATGATCCTTATGAATGTGATCAGTGTTTCCGTGAGGCTTTAGATAGCTTAGTTGCTCAGGGTGTGACCTTTGACGAATTTCAGACAATGAAGCAAATGATTCAATATAACATTTATAGTCTCCCAATTTGTTCAATCAAAGGTGTCAACAATGGCACAGAATAG 747 0.4043 MQQPLEAHWKVVKRILRYISGTTSFGLRIHPAKELTLTVYTNFDWGSDPDDRKSTNGYCKETCNSYGREGGCPWNPEERKLFLKGVEKYGKGKWKRISREFVPSKTPKQVASHAQKYFLKQEESEENTNKRRCNNIHDMNNASNVGETEPLTIREPQLQHGTIDQHNDVEPIISLGSANNNQFEVIPNSGNLHSDDPYECDQCFREALDSLVAQGVTFDEFQTMKQMIQYNIYSLPICSIKGVNNGTE* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1474 248 Pfam Myb-like DNA-binding domain 73 118 IPR001005 -
Ahy20g1474 248 SUPERFAMILY Homeodomain-like 68 122 IPR009057 -
Ahy20g1474 248 Gene3D - 72 123 - -
Ahy20g1474 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 122 IPR017930 -
Ahy20g1474 248 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 73 121 IPR006447 GO:0003677
Ahy20g1474 248 ProSiteProfiles Myb-like domain profile. 73 118 IPR001005 -
Ahy20g1474 248 SMART sant 70 120 IPR001005 -
Ahy20g1474 248 ProSiteProfiles SANT domain profile. 69 122 IPR017884 -
Ahy20g1474 248 CDD SANT 73 118 IPR001005 -
Ahy20g1474 248 PANTHER TRANSCRIPTION FACTOR KUA1 59 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1474 Ahy-Chr20 41334881 41341025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1474 2 59 Receptor kinase-like Gene Family AT4G23160 41.379 4.08e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy20g1474 Myb_DNA-binding 2.50E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1474 - - aip:107620543 524.242