Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy20g1467 | ATGTCGGACGCTTTGATCAATGGATTGGCCGGAGCTGGGGGAGGGATCATTTCTCAGCTCATAACATACCCCCTTTTAACTTTAAACACTCGCCAACAAACCGACCGTGATGTAAAGAAAATCAAGAGTAAAGTTGGAACCCTCGAACAAATGTGCCAGGTTGTGAAGGAAGAAGGGTGGGAACGATTGTATGGAGGGTTGATACCATCACTAGTTGGTACTGCTGCATCTCAGGGTGTTTATTATTATTTCTATCAAATATTCAGGAACAGAGCCGAAGAAGCTGCACTAACACAAAAAAAGATTGGCATCAGTGATGGATCAGTTGGAATGCTATCCTCTCTTTTTATTGCTGCTTTATCTGGGTCTCTTAATGTGCTTTTGACGAATCCTATATGGGTTGTTGTCACCCGTATGCAGACACAAAGAAAAGAGTCAAATAAGAAAGATCCTGACCTGGGATTGTTAATTGTTGGTGGTGAAGAAAGCGTTCCTCTTCCTGCAGATAAGCCTCTTCCATATGACACTAAACATGTGATACAAGAAGTCTATGAAGAAGGTGGAATCCTTGGTTTCTGGAATGGTGTGTTACCATCATTGATCATGGTATGCAACCCTTCCATTCAGTTCATGCTGTATGAAACCATGTTATTAAAGATGAAAAGAAGACCTTATGGGAATAAGAAGGGTAGAAATGGGGTAACTGCATTTGAGATATTTCTTCTTGGAGCTTTGGCTAAGCTTGGAGCTACTGTTGTAATTTATCCTCTTCTAGTTCTCAAGTCAAGGCTTCAAGCTAAACAGGATAAAACAGGGGACAACAGGCACCATTATACAGGCACATGGGATGCAATTGTTAAGATGATAAACTATGAAGGGATCTATGGATTCTACAAAGGCATGGGCACTAAAATTGTACAAAGTGTTCTAGCTGCTGCTGTTTTGTTCATGATGAAGGAAGAACTCGTTAAAGGCGTTCAATCCTTTCTAGCTAAAGATGGATCTAACGCTGTAAAGCGAAAAGAATGA | 1029 | 0.4082 | MSDALINGLAGAGGGIISQLITYPLLTLNTRQQTDRDVKKIKSKVGTLEQMCQVVKEEGWERLYGGLIPSLVGTAASQGVYYYFYQIFRNRAEEAALTQKKIGISDGSVGMLSSLFIAALSGSLNVLLTNPIWVVVTRMQTQRKESNKKDPDLGLLIVGGEESVPLPADKPLPYDTKHVIQEVYEEGGILGFWNGVLPSLIMVCNPSIQFMLYETMLLKMKRRPYGNKKGRNGVTAFEIFLLGALAKLGATVVIYPLLVLKSRLQAKQDKTGDNRHHYTGTWDAIVKMINYEGIYGFYKGMGTKIVQSVLAAAVLFMMKEELVKGVQSFLAKDGSNAVKRKE* | 343 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy20g1467 | 342 | Gene3D | Mitochondrial carrier domain | 9 | 333 | IPR023395 | - | |
Ahy20g1467 | 342 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 1 | 341 | IPR044712 | GO:0006862|GO:0055085 | |
Ahy20g1467 | 342 | PANTHER | PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER | 1 | 341 | - | - | |
Ahy20g1467 | 342 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 109 | 219 | IPR018108 | - | |
Ahy20g1467 | 342 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 234 | 325 | IPR018108 | - | |
Ahy20g1467 | 342 | SUPERFAMILY | Mitochondrial carrier | 3 | 321 | IPR023395 | - | |
Ahy20g1467 | 342 | Pfam | Mitochondrial carrier protein | 235 | 324 | IPR018108 | - | |
Ahy20g1467 | 342 | Pfam | Mitochondrial carrier protein | 109 | 217 | IPR018108 | - | |
Ahy20g1467 | 342 | Pfam | Mitochondrial carrier protein | 7 | 90 | IPR018108 | - | |
Ahy20g1467 | 342 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 2 | 91 | IPR018108 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy20g1467 | Ahy-Chr20 | 41087044 | 41092102 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy20g1467 | 53 | 341 | Chloroplast and Mitochondria Gene Families | AT1G25380 | 24.828 | 1.10e-24 | 101 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy20g1467 | K13354 | - | gmx:100775784 | 490.73 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy20g1467 | 20 | 41087044 | 41092102 | Ahy20g1467 | 20 | 41087044 | 41092102 | ECH | |
Ahy20g1467 | 20 | 41087044 | 41092102 | Ahy10g1077 | 10 | 26796453 | 26801540 | hybridization |