Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1464 ATGCCTTCTTCGTCTACACCAATTACTATAATCTCAAGATGCACCGTTGTCCCTCACAAACCCTCAACACTCAACGACCTCAAGCTTTCAATCTCAGACCTCAACATGCTCTCTTGTCACTACATCCAAAAGGGATGTATCTACGCTGCACCCTCACTCCCTCAAACCACTCTAATCCAATCCCTTAAAACCTCACTCTCACAAACCCTCTCCATCTTTCCTCCCCTCGCCGGAACCTTCCGAACCTCAGGTTCCGGCCATGTCTACGTCCATTCTAATGACTCCGGCGTCCATTTCATCCACGCCGCGGCTTCTGCAGTTTCTGTCTCCGACCTCTTGTCCTCAAAGGACGTCCCCAACACCTTCCAACAACTCTTCCCCTTCCACAAGAAACTAAACTACACCGCTCATTTCTCTCCGATCATGGCCGTTCAGGTCACCGAGCTCGCCGATGGTGTCTTCATCGGCGTCGCCGTCAACCATGCCGTCACCGACGGAGCCTCCCTCTGGCACTTCTTCAACACCTTCGCTGAATTCTCCAGGGGAGCCGCATCGCCGTCGAGGCTCCCGGACTTCCGCCGGGACTCAATTCTGGTCTCCGAAGCCGTCCTCCGGCTCCCGGACGGCGACCTTAAGGTCTCCTTCAATGCCAACGAGCCCTTGCGCGAGAGGATCTTCGGCTTCAGCCGTGAATCCATTCGGAGGCTGAAAGCAGAAGCAAATCGCCGCGCACCGCCGGAGAATCAAATCTGCAGCGAAGACGGCTGCTCCGCCGTTGAGTTGATGGCGAAGATGAGCAACGACACGAAATTGAAAACGGTTGCTGAAAACAAACCACATAGTGAAATCGTTGAGATCTCGTCCTTTCAGTCCCTCTGCGCGCTGACTTGGCGTGCCGTTACGCGCGCGAGGAAGATTCCGTTATCCAAAACGACGACGTTTAGAATGGCGGTTAACGTTCGCAGCAGAATGGAGCCGAAGCTTGGGGATAACTACTTTGGGAACGCGATTCAGAGCTTTGCCACGTGTGCGACCGCGGAAGAAGTAGTGTGCAGGGACCTTTCGTGGAGCGCAAAGCAGCTGAACAAGAGCGTGAGGGCGTACGATAGCGATGCGGTGAAGCGCGCCATAGAGGATTGGGAGTGCGAGCCACAGTGCTTCGCTTTGGGGAACCACGACGGCGCCACGGTGCAGATGGGGAGCTCTCCGCGGTTTCCTATGTACGATAATGATTTCGGGTGGGGGAAACCAGTGGCTGTGAGGAGCGGCGCCGCCAATAAGTTCGACGGAAAGATGTCGGCGTTTCCTGGGAGGGATGGCGGCGGTTCCGTGGACTTGGAGGTGGTCTTGGCGCCCGATGCTATGGCGGCTCTTGAGTGTGACGACGAGTTCATGCTCTATGCATCTGGGTGA 1413 0.5577 MPSSSTPITIISRCTVVPHKPSTLNDLKLSISDLNMLSCHYIQKGCIYAAPSLPQTTLIQSLKTSLSQTLSIFPPLAGTFRTSGSGHVYVHSNDSGVHFIHAAASAVSVSDLLSSKDVPNTFQQLFPFHKKLNYTAHFSPIMAVQVTELADGVFIGVAVNHAVTDGASLWHFFNTFAEFSRGAASPSRLPDFRRDSILVSEAVLRLPDGDLKVSFNANEPLRERIFGFSRESIRRLKAEANRRAPPENQICSEDGCSAVELMAKMSNDTKLKTVAENKPHSEIVEISSFQSLCALTWRAVTRARKIPLSKTTTFRMAVNVRSRMEPKLGDNYFGNAIQSFATCATAEEVVCRDLSWSAKQLNKSVRAYDSDAVKRAIEDWECEPQCFALGNHDGATVQMGSSPRFPMYDNDFGWGKPVAVRSGAANKFDGKMSAFPGRDGGGSVDLEVVLAPDAMAALECDDEFMLYASG* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1464 470 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 468 - -
Ahy20g1464 470 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 468 - -
Ahy20g1464 470 Gene3D - 8 205 IPR023213 -
Ahy20g1464 470 SUPERFAMILY CoA-dependent acyltransferases 47 187 - -
Ahy20g1464 470 Gene3D - 212 460 IPR023213 -
Ahy20g1464 470 Pfam Transferase family 7 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1464 Ahy-Chr20 40660665 40662579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1464 60 459 Monolignol Biosynthesis Gene Families AT5G48930 26.716 9.57e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1464 - - gmx:100792476 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0980 17 12218447 12220256 Ahy20g1464 20 40660665 40662579 ECH
Ahy20g1464 20 40660665 40662579 Ahy20g1464 20 40660665 40662579 ECH
Ahy20g1464 20 40660665 40662579 Ahy10g1075 10 26330004 26331934 hybridization
Ahy20g1464 20 40660665 40662579 Ahy17g0980 17 12218447 12220256 PCT
Ahy20g1464 20 40660665 40662579 Ahy7g0808 7 10214634 10216449 PCT