Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1458 ATGGACAGCGATAACAATGTAGCCGATGCCGATGAAGAATGTGGTGAGTTGGAAGACGTTGCCAAACTGAGTGTGAATGAAATATTGAAGAAGAGTTGGGACAATATTGATAATGCGTATGAGTTTTACAAGAGGTATCGACAATTTCATGGATTTGGGGTGTGGAAGGTAACTCAGCCAAATACTGTGATGGAAATTTGGTTAGATATAGATTTTTTTTGTAACAAGGAAGGATTGAGGAAACGTAAACACTACAATAGAGTTGACATAACAAAGGTACACAAACCGGATACAAAAACAAACTGCAAGGCAATGTTATCAATATATTTAGACAAAAATGAAAAGGCTTGGAAGGAGCAAAGACTCAGATTGATGGGATGGATGCATATGGCATTGCAACATCTAAGACTGGGGTACATGGCTGGTATGGCCGGTGGCTATTCTTTGTTGGGGTTCTTGAAGAATGATGTCTACAACTATTCCAACAAAACCAGGAATGCAAAAATAGCAGATGGTGATGCGAATTCTGCGATAGTGTATCTAGAGGAAAAAGTTGAGTTAGATCTAGTGGCGATTGCAAAATACGTCATGAATGATGATAGGCTAGCAAACTTGATTTGGATAGATAGAGCTAGCAGAGTTGATTATCAATACTTTGGTGATGTATTGGTATTTGATTCTACCTACAAGAAAAATAAATACAAAAAATTAGTTGTAATTTTTTCTAGATCAAACAATCATAAGCAGACGATAATATTTGGTTTTAGGTTGTTGCTTAACGAAAGTGTGTCATCGTATCGGTGGATGCTGGAGAATTTGTTGGAGATCATGTGTAGTAAAAAGTCGTGTGTCGTTGTGACTAATGGTGACAAAGATATGATTAAAGTAGTATCTAAAGTCCTCCCTGATATGACTCATCATTTGTGTGTATGGCATGTGGAGAAAAATGTGACATCAAATATGAAGGATGAAGAATTACGTGGATTGTTCAGAAGATGGTTGTATTCAGAACTTGCAATAGAGGAGTTTGAAGTGGATGGGAACAGGCTACGGATGAGTATGGACTACATGAGAAGCAATGCTCAATGTAAACATACGAGAAAAGGGAGATATGGGCAAGTACATATCTGCGGGACAAGTTATGCTTTGGGTGTTGCACATCCTCCTGCTGAGGGGATTAATGCATTCATGTCTGAGAAGCATTGA 1206 0.3814 MDSDNNVADADEECGELEDVAKLSVNEILKKSWDNIDNAYEFYKRYRQFHGFGVWKVTQPNTVMEIWLDIDFFCNKEGLRKRKHYNRVDITKVHKPDTKTNCKAMLSIYLDKNEKAWKEQRLRLMGWMHMALQHLRLGYMAGMAGGYSLLGFLKNDVYNYSNKTRNAKIADGDANSAIVYLEEKVELDLVAIAKYVMNDDRLANLIWIDRASRVDYQYFGDVLVFDSTYKKNKYKKLVVIFSRSNNHKQTIIFGFRLLLNESVSSYRWMLENLLEIMCSKKSCVVVTNGDKDMIKVVSKVLPDMTHHLCVWHVEKNVTSNMKDEELRGLFRRWLYSELAIEEFEVDGNRLRMSMDYMRSNAQCKHTRKGRYGQVHICGTSYALGVAHPPAEGINAFMSEKH* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1458 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 152 345 IPR031052 GO:0006355
Ahy20g1458 401 Pfam MULE transposase domain 222 316 IPR018289 -
Ahy20g1458 401 Pfam FAR1 DNA-binding domain 41 117 IPR004330 -
Ahy20g1458 401 PANTHER OS02G0262500 PROTEIN 152 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1458 Ahy-Chr20 39138953 39140510 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1458 MULE 1.60E-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1458 - - aip:107620534 828.55