Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1457 ATGGAGGGGAAGGAACAAGATGTGTCATTAGGAGCTAACAAGTTCCCAGAGAGGCAGCCGATCGGGACGGCGGCGCAGAGCCAAGACGATGGGAAGGACTACAAGGAGCCACCACCAGCTCCGCTATTTGAGCCTTCAGAACTGACCTCCTGGTCGTTCTACAGGGCCGGAATAGCAGAGTTTGTGGCCACTTTCCTCTTTCTATATATCACAATCTTGACGGTTATGGGAGTGAATAGGTCTTCTTCCAAGTGCGCCACTGTTGGTATTCAAGGAATTGCTTGGTCCTTTGGTGGCATGATCTTTGCCCTTGTTTACTGCACCGCTGGCATTTCTGGTGGTCACATTAACCCGGCAGTGACATTCGGTTTGTTCTTGGCGAGGAAGTTGTCTTTGACGAGGGCAGTATTCTATATGGTAATGCAGTGCCTTGGAGCAATTTGCGGTGCTGGAGTTGTTAAGGGCTTCGAGGGCAAAACCTTCTACGGCAGCCACAATGGCGGTGCCAACTTCGTCGCCCCTGGTTACACCAAAGGCGACGGTCTTGGCGCTGAGATTGTTGGCACCTTTATTCTTGTCTACACCGTCTTCTCTGCCACCGATGCCAAGCGCAACGCACGAGATTCTCACGTTCCACTTTTGGCACCATTGCCAATTGGGTTCGCTGTGTTCTTGGTTCACTTGGCTACTATTCCCATCACCGGAACCGGTATCAACCCTGCTCGGAGTCTTGGTGCTGCCATCATCTTCAACAAACACCGTGGTTGGAATGACCATTGGATTTTCTGGGTGGGTCCTTTCATTGGAGCAGCTCTTGCGGCTCTCTACCACCAAGTTGTGATCAGGGCCATGCCTTTCAAATCTAGCTAA 870 0.5149 MEGKEQDVSLGANKFPERQPIGTAAQSQDDGKDYKEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVNRSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGKTFYGSHNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPLLAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKHRGWNDHWIFWVGPFIGAALAALYHQVVIRAMPFKSS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1457 289 Gene3D Glycerol uptake facilitator protein. 40 288 IPR023271 -
Ahy20g1457 289 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g1457 289 PRINTS Major intrinsic protein family signature 220 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g1457 289 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g1457 289 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g1457 289 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g1457 289 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g1457 289 Pfam Major intrinsic protein 47 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g1457 289 TIGRFAM MIP: MIP family channel proteins 59 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g1457 289 CDD MIP 55 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy20g1457 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 288 IPR034294 -
Ahy20g1457 289 SUPERFAMILY Aquaporin-like 47 282 IPR023271 -
Ahy20g1457 289 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Ahy20g1457 289 PANTHER PLASMA MEMBRANE INTRINSIC PROTEIN 1 288 - -
Ahy20g1457 289 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1457 Ahy-Chr20 38844329 38847291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1457 1 289 Major Intrinsic Protein MIP AT4G23400 84.083 7.59e-172 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1457 K09872 - gmx:100791447 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1457 20 38844329 38847291 Ahy20g1457 20 38844329 38847291 ECH
Ahy20g1457 20 38844329 38847291 Ahy10g1069 10 26028347 26031804 hybridization
Ahy20g1457 20 38844329 38847291 Ahy17g0976 17 12177020 12179629 PCT
Ahy20g1457 20 38844329 38847291 Ahy7g0803 7 10163197 10165061 PCT
Ahy17g0976 17 12177020 12179629 Ahy20g1457 20 38844329 38847291 PCT
Ahy7g0803 7 10163197 10165061 Ahy20g1457 20 38844329 38847291 PCT