Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1433 ATGGCCACCGCCGGCGCCGCCGCCACGTCATACTTCTTCGGCACACGCCTCACAACCTCAACCCCATCTTCGGGAAGGTTCCACGCCCTCTTCAACCTCGGCACCAAGAAGGCACCACCATCTCCACCACAGAAGAAGAAGGAGCCTGCGAAGCCGGCAAAGGCGGCGAAGCCATTCTCCTCCGGTGACCGTCTCGTGTGGTTCCCGGGCGCACAGCCACCAGAATGGCTCGATGGATCAATGATCGGAGACCGCGGATTTGATCCCTTTGGGTTCGCGAAACCCGCAGAGTACCTTCAGTTCGATTTGGACTCGCTGGACCAAAACCTGGCGAAGAACGAGTATGGCCAAATCATCGGAACAAGGATTGAGACCTCAGACGTGAAACCGACGCCATTTCAACCGTACTCGGAGGTTTTTGGAATTCAGAGGTTCCGTGAGTGTGAACTTATTCATGGAAGGTGGGCCATGCTTGGTGCTCTTGGTGCTTTGGCCGTTGAAGCTTTGACCGGTGTTGCGTGGCAAGATGCTGGGAAGGTAGAGCTAGTGGAAGGATCATCATACTTGGGACTACCACTTCCATTCTCACTAACAACACTGATATGGATTGAAGTGTTAGTGATTGGATACATTGAGTTCCAAAGAAATGCAGAGCTTGACCCAGAGAAAAGGCTATACCCTGGAGGCAAGTTCTTTGACCCACTTGGATTGGCAAATGACCCTGAAGAGAAGGCAAGGCTTCAACTTGCTGAAATCAAGCACTCTCGTTTGGCCATGGTTGTCTTTCTCATCTTTGCAATTCAAGCTGCCACAACAGGGAAAGGACCCATCAGTTTCATTGCTACCTTCAACAAGTGA 858 0.5198 MATAGAAATSYFFGTRLTTSTPSSGRFHALFNLGTKKAPPSPPQKKKEPAKPAKAAKPFSSGDRLVWFPGAQPPEWLDGSMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNEYGQIIGTRIETSDVKPTPFQPYSEVFGIQRFRECELIHGRWAMLGALGALAVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKARLQLAEIKHSRLAMVVFLIFAIQAATTGKGPISFIATFNK* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1433 285 Gene3D Chlorophyll a/b binding protein domain 66 285 - -
Ahy20g1433 285 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 285 IPR001344 GO:0009765|GO:0016020
Ahy20g1433 285 SUPERFAMILY Chlorophyll a-b binding protein 61 282 - -
Ahy20g1433 285 Pfam Chlorophyll A-B binding protein 73 269 IPR022796 -
Ahy20g1433 285 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 1 285 - -
Ahy20g1433 285 MobiDBLite consensus disorder prediction 33 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1433 Ahy-Chr20 35785982 35788931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1433 12 282 Chloroplast and Mitochondria Gene Families AT3G08940 72.059 1.35e-136 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1433 K08915 - gmx:100794604 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1433 20 35785982 35788931 Ahy10g1058 10 24650862 24653522 hybridization