Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1415 ATGGCAAAATACTATGATATTGATGATATTATCACAGAGGAAGAGATTGTGTCAGTTATATTTCAGAAGCCAGCATCTGGAGTGGGGATAGATCCCAGTTCTGAAACAGACTTTATTGAAACAGGTTCAAAAGTTGAACTGCCTTTTTGGCTTGCTCATGAACTACAGTTGAGACAAGCAGTATCAGTCCATGTTCCTCCTTGTTTCAATCAAAAAACAAGGTTAGAGATCCAGGCTGATTCTGCAAGTGTGGATTTGAGGTCTAGATGTCCATTCTTCTATGAATTTGGTTGCAAGATAGCACCCATAGTTAGTGATAGAACCATTGGGTTTCTGTTGTTGTCGGCATTCAAGAGTAGGTACAAGGAAGTTCTCACCAAGGCACATACTACAGCATTTGCAGCTGGTTCCAAATTCTGGACTATTTTGACAAAAGAAGAGATCAGTTTGTACGAGGCAGCTCAATCTGCAATGGTATCCTTCAAGAAGTGGCGAAGGGGCGGACCTAGATTCCAGATAGCTTCAATTCTGGCAAGAAAGAGAAAATCAACTGACTAG 558 0.4104 MAKYYDIDDIITEEEIVSVIFQKPASGVGIDPSSETDFIETGSKVELPFWLAHELQLRQAVSVHVPPCFNQKTRLEIQADSASVDLRSRCPFFYEFGCKIAPIVSDRTIGFLLLSAFKSRYKEVLTKAHTTAFAAGSKFWTILTKEEISLYEAAQSAMVSFKKWRRGGPRFQIASILARKRKSTD* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1415 185 Pfam GINS complex protein 45 147 IPR021151 -
Ahy20g1415 185 SUPERFAMILY PriA/YqbF domain 2 66 - -
Ahy20g1415 185 CDD GINS_A_psf3 61 167 - -
Ahy20g1415 185 PANTHER UNCHARACTERIZED 1 184 IPR010492 -
Ahy20g1415 185 Gene3D - 1 167 IPR038437 -
Ahy20g1415 185 SUPERFAMILY GINS helical bundle-like 65 166 IPR036224 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1415 Ahy-Chr20 34511724 34515837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1415 1 185 Core DNA Replication Machinery Family AT3G55490 68.649 5.74e-97 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1415 K10734 - gmx:100799874 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1415 20 34511724 34515837 Ahy20g1415 20 34511724 34515837 ECH
Ahy20g1415 20 34511724 34515837 Ahy10g1046 10 24017661 24021766 hybridization