Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1405 ATGATGACACCACTTTCCTCCTCCGAAATCCTTCGTCTCTCCGCCGCGGTGATATTCACGCTCTCTCTACTGATTCCCACTTCCCATGCTCTCGGCTCCGGCGCTACCCTTGCCGTCACCGACGCCTCCGACACCGTCTGCGGCGTCGTCGCCGGGGAATCCACCCAACGCATTGAGTGCTCCCGCCTCGGTAGTCAGCTTGTCCCCGCCGTTCCCCCTAACATCTCATTCTCCACCGTCTCCGGCGGCGCCACCTTCTTCTGCGGCCTCAGGTCCGGCAACCGCACCTTGCTCTGTTGGAACACCATCACCACCACCAACGGAACCTTCACACCAAAGAGACTCTACAACAACGACACTGTTCTATTGGAGAATCTCGCCGTCGGAGAAACCCACGTTTGCGCCACCGTGGTCGGCGCCGGAACCGTTACGTGCTGGAGAACCAGCAAAACGTTCAAGTCCCCATCTAGGTCTCTTCAATTCTCTTCAATCTCATCTGGGTCAGGATTCTCTTGCGGGATTCTGAAGAACAGTTCTCAAGTTCGATGTTGGGGTGAAACGGTAATTTCAAGAGTGATTGAAAATGGGTTTAAGAACATGTCTATGTGGAGCATTGTCGCTGGTGGTTCACACGTTTGTGGGTTGAATTCAACTGGATTTCTGGTTTGTATAGGGAACAACGACAATTTTGGGCAACTTGATGTTCCAAAAAATGAAGCTTGGGAATTTGGTGAATTAGCACTTGGTGCTAGCCATGGATGTGCTTTGAGAAAGTTGAATGGAACTGGAAGCGTTGTTTGTTGGGGTGGTGATGGTAATTTCACATCGGAAGTAACAAAAGGTGTTTCCTTCGAGGTAATTGTTTCTGGGTCTAACTTCACTTGTGGATTAGTGACACGTAATCTTAGTGTTCTTTGTTGGGGTCCTGGTTGGCCTAATAATAATGGTTCAAGATTTGAACTTCCATTGCCTAGTGTTCTTCCGGGTCCTTGTGTTCAATCCTCTTGTGATAGTTGTGGTCCATATCCTGATTCTCAATCTCTGTGTTCCGATTCTGATAGCAACATTTGCAAGCCTTGTTGGCCTCCAATTCAAGCTCCAGCAGCGGCAATGGTTCCATCTTCGCTGCCACCGGGGCCTGCTCCTCGGCAGAGGTCGCGGTCGAGGACATTGACTAGGGGTTTATTGGCATTTGCTATTGTTGGATCAGTTGGTGCTGTTGCTGGAATTTGCACAATTGTTTATTGTTTGTGGAATGGTGTTTGTTTTGGGAAGAAGAAAGTGCACAATTCTGTGCAGCCAACAATCACAAGAGGTAGTAGTACTTCAAGTGGTGTTTCCAACAATAGTAGGAACAATAGCAGGCCTCTTTCGAGGACTTCCACAATTATGCGACAAGGTTCGAGGATAATGCGGCGCCAGAGGAGTGGCACCTCATCCACAAAACACCCTGATAGGGCTGAGGAATTCGCCTTGGCCGAGCTAATAGCTGCAACGGACAATTTCTCGCCTGAGAACAAGATTGGGGCTGGAAGCTTTGGAGTTGTGTACAGGGGAAAGCTTGTGGACGGCCGTGAGGTGGCGATCAAGAGGGGCGAGATTGGCTCTAAATTGAAGAAGTTTCAAGAGAAAGAAAGCGCGTTTCAGTCCGAATTGTCCTTTTTGTCGCGGCTACACCACAAGCACTTGGTTAGGCTAGTTGGTTTCTGTGAGGAGAAAGAGGAGAGGCTCTTGGTTTATGATTACATGAAGAATGGTGCATTGTATGATCATTTGCACGCCAAGAACAATGTGGAGAAGAGTAGCAGTGTCTTGAATTCGTGGAAAATGAGGATCAAAATTGCCTTGGACGCCTCCCGGGGGATAGAATATCTCCACAATTATGCGGTTCCATCCATAATCCATAGAGATATCAAGTCTTCCAACATCCTCCTCGATGCGAATTGGACTGCTAGGGTATCTGATTTTGGATTGTCTTTGATGAGTCCAGAGCCAGACCGTGATCATCGGCCGATGAAGGCAGCCGGAACGGTTGGATATATTGATCCTGAGTACTATGGCCTAAATGTGATAACAGCAAAGAGTGATGTCTACGGCTTTGGAGTAGTTCTTTTAGAACTATTAACCGGAAAGCGAGCGATATTCAAGAATGGTGAAGATGGCGACACACCAATGAGTGTGGTGGACTTCGCGGTGCCTGCAATTTTGAGTGAGGAATTGGCGAAGATTTTGGACCCTAGGGTTGGACCACCAGATGCAAATGAAGCTGAGGCAGTGGAATTGATGGCAAAGATTGCAATGCTTTGTGTGAATTTGGAAGGAAAAGATAGACCAACCATTTCTGATATTGTTACCAATTTAGAGCGTGCATTGCTTCTTTGTGAAGGTTCTCATCATCATGATAGCAATTCCAGTGGTATAATCTCCATTGTCTCAGATTGA 2442 0.4783 MMTPLSSSEILRLSAAVIFTLSLLIPTSHALGSGATLAVTDASDTVCGVVAGESTQRIECSRLGSQLVPAVPPNISFSTVSGGATFFCGLRSGNRTLLCWNTITTTNGTFTPKRLYNNDTVLLENLAVGETHVCATVVGAGTVTCWRTSKTFKSPSRSLQFSSISSGSGFSCGILKNSSQVRCWGETVISRVIENGFKNMSMWSIVAGGSHVCGLNSTGFLVCIGNNDNFGQLDVPKNEAWEFGELALGASHGCALRKLNGTGSVVCWGGDGNFTSEVTKGVSFEVIVSGSNFTCGLVTRNLSVLCWGPGWPNNNGSRFELPLPSVLPGPCVQSSCDSCGPYPDSQSLCSDSDSNICKPCWPPIQAPAAAMVPSSLPPGPAPRQRSRSRTLTRGLLAFAIVGSVGAVAGICTIVYCLWNGVCFGKKKVHNSVQPTITRGSSTSSGVSNNSRNNSRPLSRTSTIMRQGSRIMRRQRSGTSSTKHPDRAEEFALAELIAATDNFSPENKIGAGSFGVVYRGKLVDGREVAIKRGEIGSKLKKFQEKESAFQSELSFLSRLHHKHLVRLVGFCEEKEERLLVYDYMKNGALYDHLHAKNNVEKSSSVLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDANWTARVSDFGLSLMSPEPDRDHRPMKAAGTVGYIDPEYYGLNVITAKSDVYGFGVVLLELLTGKRAIFKNGEDGDTPMSVVDFAVPAILSEELAKILDPRVGPPDANEAEAVELMAKIAMLCVNLEGKDRPTISDIVTNLERALLLCEGSHHHDSNSSGIISIVSD* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1405 813 MobiDBLite consensus disorder prediction 434 477 - -
Ahy20g1405 813 MobiDBLite consensus disorder prediction 434 484 - -
Ahy20g1405 813 Gene3D Transferase(Phosphotransferase) domain 1 583 804 - -
Ahy20g1405 813 Pfam Protein kinase domain 504 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1405 813 Gene3D Phosphorylase Kinase; domain 1 463 582 - -
Ahy20g1405 813 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 9 804 - -
Ahy20g1405 813 SUPERFAMILY Protein kinase-like (PK-like) 480 787 IPR011009 -
Ahy20g1405 813 SUPERFAMILY RCC1/BLIP-II 28 271 IPR009091 -
Ahy20g1405 813 ProSiteProfiles Protein kinase domain profile. 502 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1405 813 CDD STKc_IRAK 508 789 - -
Ahy20g1405 813 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Ahy20g1405 813 SMART serkin_6 502 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1405 813 Gene3D - 200 354 IPR009091 -
Ahy20g1405 813 Gene3D - 26 199 IPR009091 -
Ahy20g1405 813 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 9 804 IPR044815 GO:0004674
Ahy20g1405 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1405 Ahy-Chr20 33693731 33696681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1405 1 813 Receptor kinase-like Gene Family AT3G55950 58.950 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Ahy20g1405 Pkinase 3.70E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1405 - - gmx:100786639 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0924 17 11067561 11070527 Ahy20g1405 20 33693731 33696681 ECH
Ahy20g1405 20 33693731 33696681 Ahy20g1405 20 33693731 33696681 ECH
Ahy20g1405 20 33693731 33696681 Ahy10g1035 10 23487433 23490438 hybridization
Ahy20g1405 20 33693731 33696681 Ahy17g0924 17 11067561 11070527 PCT
Ahy20g1405 20 33693731 33696681 Ahy7g0744 7 8808363 8811318 PCT
Ahy17g0924 17 11067561 11070527 Ahy20g1405 20 33693731 33696681 PCT
Ahy7g0744 7 8808363 8811318 Ahy20g1405 20 33693731 33696681 PCT