Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1390 ATGGGTGTTAATGGAAAAGGAAAATTATCGTTTAGGGTGAGGGTGACCAATGAAGAGGTTGTAGCGGCGGTTTTGCCAATTCAAGACCATTGGCTACCACTCTCAAACCTTGATCTCATTCTTCCACCCATTGACGTTGGTGTCTTCTTTTGCTACAACAACAAAAACACACCAATGAGCTTTGGATCAATGGTGGTGTCCCTTAAGAATGCATTGGCTCAGGCTTTGGTTTCATATTATCCATTTGCTGGCGAGGTGCTGCAAAACTCCATGGGTGAACCGGAGCTTCTTTGTAATAACCGTGGGGTTGATTTTGTTGAGGCGGAGGCTGATATTGACCTTCAGAATCTTAACTTGTACAATCCTGATGAATCCATTGAAGGCAAGCTTGTTCCAAAGAAGCAGCATGGCGTCCTTACTGTTCAGGCAACACGTTTGAAATGTGGTGGAATAATAGTGGCATGCGCTTTTGATCATCGCATAGCAGATGCATACTCAGCAAACATGTTCCTAGTATCATGGGCCAAGATAGCCCGGCCCATGAAGCCCACTACCGTGGCCACCACCTCGGCACAACCGTGTTTTCGGCGCTCCCTCCTCATCCCTCGACGTCCTCTCTGCATCCAGCCTTCCCTTGACGACATGTATGTCCCCATGAATTCCCTTCCACCACCATCTGAACTCGAACCCAAACCCGAACCCGATAATTTTGACTCACTCATAAGCCGGATATATTACATCACTGCTGATCAACTCTGCCGCATTCAATCACTTGCAAGCTCATCATTAGATCATATCAAGAATCGTACAAAGCTTGAATCTTTCTCCGCGTTCTTGTGGAAGATGGTTGCCATGGCTACATCCTCCACCACCACCACCACCGGTGGCGGAAAAAGGCTTGTTGCCAAGATAGGTGTGGTGGTTGACGGAAGGAAGAGGCTGAGCAACGGTGACAAAAGCAAAGAAGCTACGATGGATAGTTATTTTGGCAATGTTGTTTCCATCCCTTTCGGTGGGAAACCGGTAGAGGAGTTGGTGGAGAAGCCGTTGAGTTGGGTGGCAGAAGAGGTTCACAAGTTTCTGGAAACGGCAGTGACGGAAGAACACTTCCTAGGGCTCATTGATTGGGTGGAAAAGCACCGTCCCTCACCAGTGTTGGCCAGAATTTATTGCGGCAACACAACTGATGTGGGACCCGCTCTTGTGGTGTCTTCTGGTCAAAGATTTCCCGAGTCAGAATTTGACTTTGGTTGGGGAAAACCTGTGTTTGGATCATACCATTTTCCTTGGGGTGGTGATGCTGGATATGTGATGCCAATGCCAAGTCCCAAGAGAAATGGTGATTGGGTGGTGTACATGCACCTTCTCAAACCCCACATACATTTCATTGAGTCTATTGCAAATGATGTCTTTAAGCCCTTCACTTGGGATTACCTCAACAATTAA 1446 0.473 MGVNGKGKLSFRVRVTNEEVVAAVLPIQDHWLPLSNLDLILPPIDVGVFFCYNNKNTPMSFGSMVVSLKNALAQALVSYYPFAGEVLQNSMGEPELLCNNRGVDFVEAEADIDLQNLNLYNPDESIEGKLVPKKQHGVLTVQATRLKCGGIIVACAFDHRIADAYSANMFLVSWAKIARPMKPTTVATTSAQPCFRRSLLIPRRPLCIQPSLDDMYVPMNSLPPPSELEPKPEPDNFDSLISRIYYITADQLCRIQSLASSSLDHIKNRTKLESFSAFLWKMVAMATSSTTTTTGGGKRLVAKIGVVVDGRKRLSNGDKSKEATMDSYFGNVVSIPFGGKPVEELVEKPLSWVAEEVHKFLETAVTEEHFLGLIDWVEKHRPSPVLARIYCGNTTDVGPALVVSSGQRFPESEFDFGWGKPVFGSYHFPWGGDAGYVMPMPSPKRNGDWVVYMHLLKPHIHFIESIANDVFKPFTWDYLNN* 482
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1390 481 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 10 475 - -
Ahy20g1390 481 Gene3D - 11 213 IPR023213 -
Ahy20g1390 481 Gene3D - 224 467 IPR023213 -
Ahy20g1390 481 Pfam Transferase family 12 465 - -
Ahy20g1390 481 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 475 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy20g1390 Ahy-Chr20 31810110 31812753 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1390 22 464 Monolignol Biosynthesis Gene Families AT5G48930 28.070 2.15e-37 140
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1390 - - cam:101501659 639.802