Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1376 ATGGCCCTGGCTTTGCAAAAGGTGAGGTCATTATCACTCTCCCCACCACCCTGCTGTCCTCCTCGACACTGCTGCCGCCACACCAACCGTGCAAGACTAGACTATGCTGCCAATTCAGGACGATTTCTGCAGCAGCAACAGTTATATGCTAGAATGGAAGAGGAAGATGTAGTCTCCTATTTTCATGGTGCAGCAGCTATGGCCGACGAAAATTTGTGTGTCGGCAACGAAGAAGAACTAGTTTTCGATGACCTAGATGCTTGTCTAGGTAATGAATCTTCATCCGAGGCGGGTGAGGATGCAAATATGGAGGGATATTTTGACGATAATGTTGGTGATGATTTTTACGAAAACTGGGAAGACAGAGGCATTGACGAGATTGCTGACTTTGGCCAAATTAACTTTAAAGAAATAACTTTTGATCATATGAGATTGTTACATTTTCCTGATCAACATGTGACACAACAGCAGTTTGTTTGCTTTAAGCAAGGGTTCAGAGATTTTGCTGTTGATAAAGAGGCCCACGAACATAAGCGAGAGCCTAAGCCTGAGACTAGATGTGGCTGTCTAGCACAGATGCGTGTTCATCTACATTTGGAGAGTGGTAGATGCATTATTTCATACTTTGATGATGTTCACAATCATGAGATGCTTGATGAAACACTTACATTTATGCTCCCTAGGAATAGAAAGATGAATGCTACCGCAATTGAACAAATGAACATGATGTTAAAAATTGATAAACAGAGAAAGCCAATAGGGGGCGATATAATGTCTTGTCTTCGGTGGTTGGAATCATTTGCAGAGGAGAATCCTGGAACGTTTGTGCATTACTTAGTGGATAAAGAGGGTCGTTTAGTGCACCTTTTTTGGTCTGATAACTATAGTAAATTAGATTACCATGTGTTGAAAGATGTTGTAGCATTTGATGCAATTTATCAGAAGAATAAGTACATGTGTCCATTGGTTGTATTTTCTGGCGTAAATCACCATAACCAAACCATTGTTTTTGCTGCTGCCCTTGTTGCAAATGAGAGTGGGGAGACATATTCCTGGCTACTTGAAAGATTTTTGGAAGCTATGAAGGGGAAAGATCCTGAGTGTGTTATCACAGATGGGCATGGAATAATGAAAAAGGCTATTGAAAAAGTTTCAAAGTTTGAAGTTAGGTGGGAAAGATTAGTCATTGAGCTTCAGCTTCAGGATAATCAGTGGGTCTGTGACCTTTATAATCGGAGAAAAATTTGGGCAACGGCTCACATTCGTGGCCATTTTTTTGGTGGATTTCGGACGACATCAAGATGCAAGGAGATGAGGTCTCGGGAAACACAATCCGATATGCATAGTGTGGTTGGACACTTTGTGTTGCAAATTCCCTTTCATGATTTGGAGAGGTCTACTGCAAAGTTACTAATAAGGGAGATATTTCTCTTGTTTCGGCCCATTCTGTCCCATGCATGTACATTAAAGGTCCGGTCTTGTACGTTGACTCCGACATCGAACATATACATCATTTCACGGTTGGGCAATTCACAGAACTACTGGCATATTTTGCACTATCCCGAGGATTCAATTTTTAAGTGCTCTTGTTTAAGGATGGAATCCCTTGGAATACCATGCGATCACATTGTGGCCCTTCTTGTACATCTTGATTTCATGAAAATTCCAATGAGTCTTGTTTTAGAGAGGTGGTCTAAGAATGATCGGTCGAAGGTGAGACAATATGTTGACAAGGGACCATTTTGTTGGGATGGTATGGTAACTTGCCACAATTGGATGCTAAACGACCTATGTAGGGAGATGTTTGTGCTTGCATCAGTGAGAAAAGATCAATCTGCAACGGTCATTGAGAAGGTACGCAGCGAGATCACTCGATTAAAGCACGATATGGAAGTTGGGCCTTCTCCACCCGCGGTTGTTGTCCAATCGTCCACACTCGAGGGGTGTGTTCAAGATCCACTTGTTGTGCGTCACAAGAAAGAGGCCAAAGAACGAGTCAATTAA 2004 0.4202 MALALQKVRSLSLSPPPCCPPRHCCRHTNRARLDYAANSGRFLQQQQLYARMEEEDVVSYFHGAAAMADENLCVGNEEELVFDDLDACLGNESSSEAGEDANMEGYFDDNVGDDFYENWEDRGIDEIADFGQINFKEITFDHMRLLHFPDQHVTQQQFVCFKQGFRDFAVDKEAHEHKREPKPETRCGCLAQMRVHLHLESGRCIISYFDDVHNHEMLDETLTFMLPRNRKMNATAIEQMNMMLKIDKQRKPIGGDIMSCLRWLESFAEENPGTFVHYLVDKEGRLVHLFWSDNYSKLDYHVLKDVVAFDAIYQKNKYMCPLVVFSGVNHHNQTIVFAAALVANESGETYSWLLERFLEAMKGKDPECVITDGHGIMKKAIEKVSKFEVRWERLVIELQLQDNQWVCDLYNRRKIWATAHIRGHFFGGFRTTSRCKEMRSRETQSDMHSVVGHFVLQIPFHDLERSTAKLLIREIFLLFRPILSHACTLKVRSCTLTPTSNIYIISRLGNSQNYWHILHYPEDSIFKCSCLRMESLGIPCDHIVALLVHLDFMKIPMSLVLERWSKNDRSKVRQYVDKGPFCWDGMVTCHNWMLNDLCREMFVLASVRKDQSATVIEKVRSEITRLKHDMEVGPSPPAVVVQSSTLEGCVQDPLVVRHKKEAKERVN* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1376 667 Pfam SWIM zinc finger 528 550 IPR007527 GO:0008270
Ahy20g1376 667 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 382 573 IPR031052 GO:0006355
Ahy20g1376 667 Pfam FAR1 DNA-binding domain 150 218 IPR004330 -
Ahy20g1376 667 SMART 26again6 526 553 IPR006564 GO:0008270
Ahy20g1376 667 PANTHER OS01G0607050 PROTEIN 382 573 - -
Ahy20g1376 667 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 177 384 IPR031052 GO:0006355
Ahy20g1376 667 Pfam MULE transposase domain 306 384 IPR018289 -
Ahy20g1376 667 PANTHER OS01G0607050 PROTEIN 177 384 - -
Ahy20g1376 667 ProSiteProfiles Zinc finger SWIM-type profile. 514 551 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1376 Ahy-Chr20 30715554 30719351 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1376 MULE 5.70E-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1376 - - ahf:112785710 1360.51