Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1374 ATGAAGGGATATGAGCCTCGTTCAAGTTCTTCTTGTGCAGCCTGCAAATTACTCAAGAGAAGATGCATCCCCAACTGCATCTTCGCGCCGTATTTTCGCTCCGATGAGTGCAAGAAATTCGCAAAAGTTCACAAGGTGTTCGGGGCAAGCAATGTGAGCAAGATCCTCATTGAGGTCCCTGAAGAGCAAAGAGAGGACACGGTGAATTCTCTCGCATATGAGGCCGAAGCCAGGCTCCGCGACCCGGTTTATGGATGCATTGGCGCCATAGCGCTCCTTCAGAGGAAGATGGTAGAGCTACAACATGATCTGGCGATTGCTAAGGATCGTCTGGCTCGTGTTGTAGCTTCTACTACATCTGCCTCTGATTCTGCTTTGGTCGCTACTACTAGTAGCGACCAAATCATGCATGGTTCTTCTTCTTATTCCCATGTTAGCTTGCCCCCTTTTCCTTGCAGTGATTTCAGTGATAGCTTCTGCCATAGCTCTTCTTCTTCATCTCAATTCTTGAGCCGACATGATCAAGCGGTTGATGATTTCACTCAAATTCCATACATATTTTAA 564 0.4699 MKGYEPRSSSSCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARVVASTTSASDSALVATTSSDQIMHGSSSYSHVSLPPFPCSDFSDSFCHSSSSSSQFLSRHDQAVDDFTQIPYIF* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1374 187 Coils Coil 90 110 - -
Ahy20g1374 187 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 165 - -
Ahy20g1374 187 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Ahy20g1374 187 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Ahy20g1374 187 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1374 Ahy-Chr20 30409089 30410205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1374 1 111 AS2 family AT3G11090 81.081 1.31e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy20g1374 LOB 1.60E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1374 - - gmx:100305534 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1374 20 30409089 30410205 Ahy20g1374 20 30409089 30410205 ECH