Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1344 ATGGAAGAGGCAACATGTTCATTCAGTGATGATAATCTTCTTGGAAAAGGTGGATTTGGAAAGGTATACAGAGGAACTCTGCAAGGACAGGTTGTAGCAATAAAAAAGATGGAGCTGCCAGCTATTAGAGAAGCTAAAGGAGAGCGCGAATTTCGGGTGGAAGTGGACATATTGAGCAGACTAGACCACCCAACTCTTGTTTCCTTGATTGGCTACTGTGCTGATGGAAAGCACGGATTCTTAGTATATGAGTATATGCAAAATGGGAACCTGCAACATCATCTGAATGTGCCTAATGTAACTGCTAGAGTGTTCGGTACTTTTGGCTATTTTGATCCTGAGTATACATCGACCGGAAAACTCACTCTACAAAGTGATGTTTATTCTTTTGGCGTTGTTCTTCTGGAGATTTTGATTGGACGTAGAGTCGTAGATCTAAACCAAGGTCCAAATGATCAAAACCTTTTGCTCCAGGTGAGACACCTACTAAATGACCAGAAAAAGCTTCGAAAGGTGATAGATGCAGAGATGGCATTAAATTAG 543 0.4125 MEEATCSFSDDNLLGKGGFGKVYRGTLQGQVVAIKKMELPAIREAKGEREFRVEVDILSRLDHPTLVSLIGYCADGKHGFLVYEYMQNGNLQHHLNVPNVTARVFGTFGYFDPEYTSTGKLTLQSDVYSFGVVLLEILIGRRVVDLNQGPNDQNLLLQVRHLLNDQKKLRKVIDAEMALN* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1344 180 Gene3D Transferase(Phosphotransferase) domain 1 85 180 - -
Ahy20g1344 180 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Ahy20g1344 180 ProSitePatterns Protein kinases ATP-binding region signature. 14 36 IPR017441 GO:0005524
Ahy20g1344 180 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL28-RELATED 1 96 - -
Ahy20g1344 180 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL28-RELATED 99 178 - -
Ahy20g1344 180 SUPERFAMILY Protein kinase-like (PK-like) 3 162 IPR011009 -
Ahy20g1344 180 PANTHER OS01G0750732 PROTEIN 99 178 - -
Ahy20g1344 180 Pfam Protein kinase domain 9 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1344 180 PANTHER OS01G0750732 PROTEIN 1 96 - -
Ahy20g1344 180 Pfam Protein tyrosine and serine/threonine kinase 110 139 IPR001245 GO:0004672|GO:0006468
Ahy20g1344 180 ProSiteProfiles Protein kinase domain profile. 8 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1344 Ahy-Chr20 28445806 28446739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1344 99 177 Receptor kinase-like Gene Family AT3G58690 44.304 2.90e-14 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Ahy20g1344 Pkinase 1.00E-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1344 - - ahf:112785688 362.844