Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1337 ATGTTGTTGGAGAACTTCAAAGAACAACTTGCTTTGTCTGTGAGAAGCATCCAGTGGAGCTATGCAATATTCTGGTCTACTTCATCTACCCAACCCGGCAGGGTGTTGAGTTGGGGGGAAGGATATTACAATGGAGACATTAAGACAAGGAAGACAAGTCAAGGAGTGGAACTCAATTCTGATCAGATAGGGTTGCAGCGGAGTGAGCAGCTTCGAGAGTTATACAAGTCCCTCAAAGCTGTAGAAGCCAGCCCTCAAACCAAAAGGCGTTCAGCAGCACTGTCTCCGGAGGATCTCACAGATACAGAATGTGAAGAGGCAGGTTGGGACGTGGTAATTGCTTGCCATAGTAAGAGTCTAAGTATCTGTTTTTCTTTAGAATGTATCATGTTATTACTTGCCATAGTAATATGTTATTGA 420 0.4381 MLLENFKEQLALSVRSIQWSYAIFWSTSSTQPGRVLSWGEGYYNGDIKTRKTSQGVELNSDQIGLQRSEQLRELYKSLKAVEASPQTKRRSAALSPEDLTDTECEEAGWDVVIACHSKSLSICFSLECIMLLLAIVICY* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1337 139 PANTHER TRANSCRIPTION FACTOR TT8 5 103 - -
Ahy20g1337 139 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 106 IPR025610 -
Ahy20g1337 139 PANTHER TRANSCRIPTION FACTOR EGL1 5 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1337 Ahy-Chr20 28024881 28027609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1337 4 103 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 64.151 1.79e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1337 - - aip:110267647 253.832