Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1298 ATGAATCCGTCGGATGGCGATTTTTTCGGATCAGACTCCGATGTTGGGTTCCCTAGTGGAGACGATCTAGAATTTTTAGACGACGATTCAGAGGCTGATGAAGATAGACCTCAAGATAAGAGAATAGCAAAGCTGTCACAAGAATATATCATGCAACTTCAGTTTACAGATGAGGAAGCTGTCTATCGATTCTATAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGTGATGGTTCCGTAATTATGCGCCAAATTGTTTGCAATCGGGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCCCGGCTAGAATTCATGCAAGACTAGATACAAAAATTCAGCAATGGAAGGTTGTTTCGTTCTACGAAGAGTACTCTCATGAATTAGTTGCTCCACTCGACGTTAGCATGATGCCTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAGGCAAAGAATTTGCACGACATAGGCATCAGGACCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGGTGGATATGCAAACTTGCCATTCAACCAAAAAAACATGTACAACCTCATTACTCAATATAGGAAGGAAAAGGTGAAGGGTGGTGATGCAAATGCTGCAATAAGCTATCTGAGAGGTAAAGCTGGGAACGATTCTTATTTCTTTGGCAAGTACACATTAAGTAATGAAAATCGATTGGAAAATTTATTCTGGGCTTATGGGACTAGCCGCATTGATTATGAGTGCTTTGGGGATGTATTGACATTTGATTCGACTTACAATAGGAATGTCTACAATAAACCACTTGTTATATTTTCTGGTAGCAATCATCATGGGCAGACCGTCGTATTCGGTTGTGGTCTTCTTGTTAATGAGGATATTGGTTCATAG 954 0.4203 MNPSDGDFFGSDSDVGFPSGDDLEFLDDDSEADEDRPQDKRIAKLSQEYIMQLQFTDEEAVYRFYKTYAMMHGFAVRLDEVRRDSDGSVIMRQIVCNRAGSRKEEVEKDERIRDHRPLTRSCCPARIHARLDTKIQQWKVVSFYEEYSHELVAPLDVSMMPEYRTFSVSDKAQAKNLHDIGIRTCHILGYLAAQKGGYANLPFNQKNMYNLITQYRKEKVKGGDANAAISYLRGKAGNDSYFFGKYTLSNENRLENLFWAYGTSRIDYECFGDVLTFDSTYNRNVYNKPLVIFSGSNHHGQTVVFGCGLLVNEDIGS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1298 317 PANTHER OS02G0262500 PROTEIN 49 315 - -
Ahy20g1298 317 Pfam MULE transposase domain 274 315 IPR018289 -
Ahy20g1298 317 MobiDBLite consensus disorder prediction 1 38 - -
Ahy20g1298 317 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 49 315 IPR031052 GO:0006355
Ahy20g1298 317 Pfam FAR1 DNA-binding domain 63 152 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1298 Ahy-Chr20 26260369 26261322 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1298 FAR1 1.40E-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1298 - - aip:110268388 634.795