Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1297 ATGGCAACGAAGAAGCAGAACGATGATAACACCAGGAAGGCGGGCTTTACTCACTGTCGAAGAAGCCGTACGCTCGCCGTCGTTCTCACCCTCAAGCAGCCAACTCGCTTTCGCCCTTCCCTCAACTCCCCTTTTCTAGCAAAACAATGGTTCAGCTATGCCGAGTTAAAACTTGCCACTGGTGGATTCTCTGAGGCCAACTTCCTGGCTGAGGGGGGATTTGGATCCGTTCACAGAGGGGTTCTACCGGATGGACAAGTCGTTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGACCTTGAGTTTTGCTCAGAGGTAGAAGTCCTGAGTTGTGCTCAGCACCGAAATATTGTTATGCTGATTGGATTCTGTATAGAGGATAAGAGAAGGCTACTAGTTTACGAGTACATATGCAATGGATCATTAGATTCACATTTATTTGGGAGACAGCGAGAACCATTAGAATGGGCTGCACGGCAAAAAATTGCCATTGGAGCTGCTTGTGGGTTACGATATCTTCATGAAGAGTGTAAAGTGGGATGCATTATCCACCGTGACATGCGGCCTAACAACATTCTCATAACTCATGATTTTGAACCACTGGTTGGTGATTTTGGATTGGCGAGGTGGCAACCTGATGGAGACACGGGTGTGGAAACCCGAGTAATTGGAACATTCGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACTGAGAAAGCTAATGTTTATTCATTTGGGGTGGTATTGGTGGAGATTGTTACAGGGAGAAAAGCTGTGGATCTCACGCGGCCTAAGGGACAGCAGTGTCTTACTGAGTGGGCACGACCTCTGTTAGAAGAATATGCCATTGAGGAACTGATTGATCCAAGGCTGGGGAACCAATACTTAGAAAATGAGGTATATTGCATGTTGCATGCTGCATCATTATGCATACGGCGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTTCGTATAATGGACGGCGACATGGTCATGGACACAAGTTACATTTCAACTCCAAGTTATGATGTGGGAAACCGGAGTGGCCGACTCTGGTCGGAGCCGCTGCAGAGGCAGCACCATTACAGGGGTCCTCTGTTAGAGGAGTCACTTGAATCATTCAGTGGGAAGCTATCTCTTGACAAATAG 1170 0.4726 MATKKQNDDNTRKAGFTHCRRSRTLAVVLTLKQPTRFRPSLNSPFLAKQWFSYAELKLATGGFSEANFLAEGGFGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNIVMLIGFCIEDKRRLLVYEYICNGSLDSHLFGRQREPLEWAARQKIAIGAACGLRYLHEECKVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKANVYSFGVVLVEIVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLGNQYLENEVYCMLHAASLCIRRDPHSRPRMSQVLRIMDGDMVMDTSYISTPSYDVGNRSGRLWSEPLQRQHHYRGPLLEESLESFSGKLSLDK* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1297 389 SUPERFAMILY Protein kinase-like (PK-like) 46 342 IPR011009 -
Ahy20g1297 389 PANTHER INACTIVE PROTEIN KINASE SELMODRAFT_444075 43 387 - -
Ahy20g1297 389 ProSitePatterns Tyrosine protein kinases specific active-site signature. 184 196 IPR008266 GO:0004672|GO:0006468
Ahy20g1297 389 Gene3D Phosphorylase Kinase; domain 1 31 138 - -
Ahy20g1297 389 ProSiteProfiles Protein kinase domain profile. 63 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1297 389 Pfam Protein tyrosine and serine/threonine kinase 68 331 IPR001245 GO:0004672|GO:0006468
Ahy20g1297 389 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 43 387 - -
Ahy20g1297 389 CDD STKc_IRAK 69 335 - -
Ahy20g1297 389 Gene3D Transferase(Phosphotransferase) domain 1 139 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1297 Ahy-Chr20 26154031 26156734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1297 51 352 Trihelix Transcription Factor Family AT1G70460 52.244 7.37e-104 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Ahy20g1297 PK_Tyr_Ser-Thr 1.50E-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1297 - - ahf:112783851 796.578