Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1296 ATGATTATGTGGGATTATGGAAAGCATTTGTCAGCGAGTTGCTGTATAGAAAAACAAAAAGTTGGGGTTTACCTTCATGACCCCACTGCATTTCTTGCAACTGTTGATCCTACTCTTGTAACCTGGTTGGAGGGTAGTGTTAGATATCAAACCAGTGGCATTACACGAGGTCTTACAATACTGTACAACAAACAGAAAAAGTGCTGTTATGCTGAGGATGAGATCCTGAAAACTGTGTATCTTCGTTTTTGGGAGATGGATCCGTCGGATAGCGATTTTTTCGGATCAGACTCCGATGTTGGGTTCCCTAGAGGAGACGATCTAGACTTTTTAGACGACGATTCAGAGGCTGATGAAGATAGACCTCAAGATAAGAGAATATCAGAGCTGTCACAAGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGCTGTCTATCGATTCTATAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGATGCGATAGCGATGGTTCCATAATTATGCGCCAAATTGTTTGCAATCGGGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCCCGGCTAGAATTCGTGCAAGACTAGATACAAAAATTCAGCAATGGAAGGTTGTTTTGTTCTACGAAGAGCACTCTCATGAATTAGTTGCTCCACTCGACATTAGCATGATGCCTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAGGCAAAGAATTTGCACGACATAGGCATCAGGATCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGGTGGATATGCAAACTTGCCATTCAACCAAAAAGACATGTACAACCTCATTACTCAATATAGGAAGGAAAAGGTGAAGGGTGGTGATGCAAATGCTGCAATAAGCTATCTGAGAGGTAAAGTTGGGAACGATTCTTATTTCTTTGGCAAGTACACATTAAGTAATGAGAATCGATTGGAAAATTTGTTCTGGGCTGATGGGACTAGCCGCATTGATTATGAGTGCTTTGGGGATGTATTGACATTTGATTTGACTTACAATAGGAATGTCTACAATAAACCACTTGTTATATTTTCTGGTAGCAATCATCATGGGCAGACCGTCGTATTCGGTTGTGGTCTTCTTGTTAATGAGGATATTGGTTCATACAAGTGGCTCTTGGAAACTTTTTTGGAAGCAATGGGGAGTAAACACCCTACGGTAGTTGTCACTGACGGAGATCTTTCAATGAGAGAAGCAATTAAACAGGTCTTTCCTTCTGCAACACATCGACTATGTGCATGGCACTTACATAGGAATGCATGCGAGAAGGTTAAAAACAGTGGATTTCTAATGGACTTCAAGCAATTGATTTATGCCAATGTGAGTGTTGAAGAGTTTGAGGTCAGGTGGGAAGACATGGTGGCCAGGTATAACTTATCAAGCAACTCTTGGGTCATCCAAACCTATGAGATGAGGAATCTATGGGCTCTTGCATATTTAAGGGACCAATTTTTTGGGCGAATCAGGACAACATCCCAGTGTGAAGGGATTAACTCTCTAATAAAAGCATATATGAGAAAGAAAGATACCCTTCTTGAATTCATCAATAACATGGAGACCGTGGTTATCCATTACAGGAACAATGAAAGAGTCGCAGAGTTCAATAGTAAATATACCGCTCCAGTACTTGTGACTTCTTTGCCGACACTTGAAGATTTTGCTGCAAAGACTTTCACTCGTAACATGTTCCGGGAGGTCAGGAAGGAAATTGAGGGTGCTTGTGCAATGAATACAGAGTTGGTAATTCAGGATGGTGGAAAACTATACTTCAAGTGTAACATTTTTGGAGTGCCAGAGATTCATCATGTGGTTGAGTTTGACAGAATTCGGGAGATTCTTTGTTGCGAGTGTCTGTGGTTCGAAAATAGAGGAATTCCCTGCATGCATATATTCACCTGCCTAAAGCACCAACACGTTGAAGTCATTCCAGAAAGCTTAGTGTGCAAGCGTTGGACGAAGAATACCAAGAGTGACTTCATGAAGTCAAACGTCGATGATCCAAGTGATTCTGATAAGGTACTAAAGTGTCGTTTGGGTGTGTTGGGTGCTGAGTGTTCTAGGTTGATGGATTTGGCCTGTAAGAATTCAAGTGATTTTGTCGAAGCAATGAATAGTGTTGTCGACACAATTACAAAACTCCAAAATGTGACAGGGCACTACAACAAAAGTTGTCCTAATGCTCCTGGTAGAATCCCAAAGGAGCCAGTAGACGATGATACAGAAACGAATATCAGCAGCATCCTCCCTAAGCACAAAAGACATGACAGTATGAAAAATCAGCATAAGATGGAAAAAGATAGGAACATTAGTGGTGGAACAACACCAACCTCAGCAGCTAAGTCGGCTTTTATTGATCAAGTGAAAACATCAAGTCTTGGTCCCAATATCCTGGTTTGTGCGTCTACAAGTAACGAAGAGTCCGGGATGGGTTCCATACCAGCTGGGTCTTCTGTTGTGGCCCCTAAAACTGGAATGGCAGCTTGA 2586 0.4203 MIMWDYGKHLSASCCIEKQKVGVYLHDPTAFLATVDPTLVTWLEGSVRYQTSGITRGLTILYNKQKKCCYAEDEILKTVYLRFWEMDPSDSDFFGSDSDVGFPRGDDLDFLDDDSEADEDRPQDKRISELSQEDIMQLQFTDEEAVYRFYKTYAMMHGFAVRLDEVRCDSDGSIIMRQIVCNRAGSRKEEVEKDERIRDHRPLTRSCCPARIRARLDTKIQQWKVVLFYEEHSHELVAPLDISMMPEYRTFSVSDKAQAKNLHDIGIRICHILGYLAAQKGGYANLPFNQKDMYNLITQYRKEKVKGGDANAAISYLRGKVGNDSYFFGKYTLSNENRLENLFWADGTSRIDYECFGDVLTFDLTYNRNVYNKPLVIFSGSNHHGQTVVFGCGLLVNEDIGSYKWLLETFLEAMGSKHPTVVVTDGDLSMREAIKQVFPSATHRLCAWHLHRNACEKVKNSGFLMDFKQLIYANVSVEEFEVRWEDMVARYNLSSNSWVIQTYEMRNLWALAYLRDQFFGRIRTTSQCEGINSLIKAYMRKKDTLLEFINNMETVVIHYRNNERVAEFNSKYTAPVLVTSLPTLEDFAAKTFTRNMFREVRKEIEGACAMNTELVIQDGGKLYFKCNIFGVPEIHHVVEFDRIREILCCECLWFENRGIPCMHIFTCLKHQHVEVIPESLVCKRWTKNTKSDFMKSNVDDPSDSDKVLKCRLGVLGAECSRLMDLACKNSSDFVEAMNSVVDTITKLQNVTGHYNKSCPNAPGRIPKEPVDDDTETNISSILPKHKRHDSMKNQHKMEKDRNISGGTTPTSAAKSAFIDQVKTSSLGPNILVCASTSNEESGMGSIPAGSSVVAPKTGMAA* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1296 861 MobiDBLite consensus disorder prediction 755 774 - -
Ahy20g1296 861 Pfam FAR1 DNA-binding domain 148 237 IPR004330 -
Ahy20g1296 861 Gene3D - 6 86 IPR036452 GO:0016799
Ahy20g1296 861 PANTHER OS02G0262500 PROTEIN 133 821 - -
Ahy20g1296 861 MobiDBLite consensus disorder prediction 785 811 - -
Ahy20g1296 861 Pfam MULE transposase domain 359 453 IPR018289 -
Ahy20g1296 861 MobiDBLite consensus disorder prediction 838 861 - -
Ahy20g1296 861 MobiDBLite consensus disorder prediction 785 802 - -
Ahy20g1296 861 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 133 821 IPR031052 GO:0006355
Ahy20g1296 861 ProSiteProfiles Zinc finger SWIM-type profile. 634 672 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1296 Ahy-Chr20 26142024 26146616 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1296 MULE 1.10E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1296 - - aip:107620373 1734.92