Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1281 ATGTCGCCGGCGGCGGGTGTCAACGTCCCCCTCCTGCCGGAATCCACTGGATCCTCTACTCAACCGGCGTCAGTCTCTGGCGCCGTCTTCAACGTGGCGACGACCATCGTCGGAGCAGGAATCATGTCGATCCCGGCGATCCTAAAGGTCCTCGGCGTTATACCTGCGTTCGCCATGATTGCAGTGATCGCAGTTCTCGCTGAAGTGTCAGTTGAGTTTCTGTTGAGGTTCACGCACTCCGGCAAAACGACGACGTACGCCGGCGTCATGAGAGAAGCGTTCGGAACCTTCGGAGCACTTGCCGTACAAGTTTGTGTCATCGTCACAAACATTGGAGCCTTGATTCTATACCTAATTATTATTGGGGATGTGCTATCTGGAAAGGGAAATGAAGGTGGAGAAGTGCACTTGGGCCTTCTGCAGCAGTGGTTTGGGATTCATTGGTGGAATTCCAGGGAATTTGCTTTGTTCATAACCTTGGTCTTTGTTATGCTTCCATTGGTCTTGTACAAACGTGTAGAATCCTTGAAGTACAGTTCAGCAGTGTCAACTTTTCTGGCAGTGGTGTTTGTTGCAATATGTTCTGGGATGGCAGTTGTTGCAGTCTTGCAAGGAAAAACACAAACCCCAAGATTGTTTCCTCGCTTAGATTACCAAACATCCTTCTTTGATCTCTTCACGGCAGTTCCAGTTGTAGTTACGGCCTTCACATTTCATTTCAATGTGCATCCAATTGGGTTTGAGCTTGCCAAGGCATCCCACATGACCAAAGCGGTTCGACTAGCCTTGATGCTCTGTGCTGTCATATACTTTGCAATCGGTCTATTCGGGTACCTCTTATTCGGAGACTCGACACAATCGGACATTCTGATCAATTTCGATCAGAATGCTGGTTCTGCAGTTGGTTCCTTGCTCAATGGTGTGGTCCGCATAAGCTATGCATTACACATCATGCTGGTGTTTCCTCTTTTGAACTTCTCCCTGAGAGCCAACATAGATGAACTCCTCTTCCCCAAGAAGCCTATGCTTGCCAATGACAACAAAAGATTTGTGATCCTTACTCTGGTGCTTCTAGTCGTCAGCTACCTTGCTGCCATAGCTATTCCGGATATTTGGTACTTCTTTCAGTTTCTGGGATCCACAACTGCGTTGTGCCTTGCCTTTGTTTTCCCAGGAGCTATTGTTTTAAGGGATGCTTATGAGGTATCAACGAGAAGGGACAAAATTATAGCACTAGTTATGATTATACTAGCTGTAGTAACAAGTGTGATGGCCATTTCCACCAATGTATATAATGCTTTGAGTAGCAAGTCATGA 1317 0.4692 MSPAAGVNVPLLPESTGSSTQPASVSGAVFNVATTIVGAGIMSIPAILKVLGVIPAFAMIAVIAVLAEVSVEFLLRFTHSGKTTTYAGVMREAFGTFGALAVQVCVIVTNIGALILYLIIIGDVLSGKGNEGGEVHLGLLQQWFGIHWWNSREFALFITLVFVMLPLVLYKRVESLKYSSAVSTFLAVVFVAICSGMAVVAVLQGKTQTPRLFPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKASHMTKAVRLALMLCAVIYFAIGLFGYLLFGDSTQSDILINFDQNAGSAVGSLLNGVVRISYALHIMLVFPLLNFSLRANIDELLFPKKPMLANDNKRFVILTLVLLVVSYLAAIAIPDIWYFFQFLGSTTALCLAFVFPGAIVLRDAYEVSTRRDKIIALVMIILAVVTSVMAISTNVYNALSSKS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1281 438 Pfam Transmembrane amino acid transporter protein 23 427 IPR013057 -
Ahy20g1281 438 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 436 - -
Ahy20g1281 438 MobiDBLite consensus disorder prediction 1 23 - -
Ahy20g1281 438 PANTHER AMINO ACID TRANSPORTER 3 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1281 Ahy-Chr20 25419117 25421893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1281 1 432 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.447 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1281 - - gmx:100815694 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1281 20 25419117 25421893 Ahy20g1281 20 25419117 25421893 ECH
Ahy20g1281 20 25419117 25421893 Ahy10g0948 10 17465136 17467910 hybridization
Ahy20g1281 20 25419117 25421893 Ahy17g0847 17 9791366 9794754 PCT
Ahy20g1281 20 25419117 25421893 Ahy7g0674 7 7682394 7685607 PCT
Ahy17g0846 17 9784383 9787264 Ahy20g1281 20 25419117 25421893 PCT
Ahy7g0673 7 7675196 7678357 Ahy20g1281 20 25419117 25421893 PCT