Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1260 ATGGAGAAAAGGGGGAATGTTTTGATGCAAAAGTATGAATTTGGCAGGCTATTAGGCCAAGGAAACTTTGCAAAGGTTTACCATGCAAGGGACCTCAAAACCGGTGACAGTGTCGCCATTAAGGTGATCGACAAGGAGAAAATTCTGAAAGTTGGGATGATGGATCAAACCAAGCGAGAGATATCTATTATGAGACTGGTTAAGCACCCCAATGTGTTGCGGCTTTATGAGGTCTTAGCCACCAAAACCAAGATTTACTTCATCATAGAATATGCAAAAGGGGGTGAACTATTCAACAAGGTAGCAAGAGGTAAACTACATGAGGACATGGCAAGGAGGTACTTTCAACAACTGATCAGTGCTGTCGATTTTTGCCACAGAAGGGGTGTTTATCATAGGGATTTGAAGCCGGAAAACTTGCTCTTGGATGATAATGGTGTTCTTAAGGTAGCAGATTTTGGACTGAGTGCACTAGTTGAGTCTCATAGCCAAGCCAACATGCTGCAAACCGTTTGTGGAACGCCTGCATACGTCGCTCCTGAGGTTATAAGTCGAAAGGGTTATGATGGAGCCAAAGCCGATGTATGGTCTTGTGGAGTGATCTTATATGTTCTCTTGGCTGGTCATTTGCCATTCTATGATTTGAATCTTATGGCACTGTACAGGAAAATTACCAAAGCAGAATACAAATCTCCCAACTGGTTTTCATTTGAAGCGCGCAGACTATTAGCAAGGATCCTTGATCCCAACCCAAAAACAAGGATATCCACTGCAAAAGTTATGGAAAGTTCTTGGTTCAGAAAGGGGCTCAATTTGAGATCAGATCAAAAGCGGAGAGAGGGTCCAGATTCAGCTTCAGCTGATTCAGATAAAGTTCTCGGCCTATGTGACAGTGGAAGTTCTTCTGCAGAGGCAAATCAAGCATTGGTTAACTATAACTTAAATGCTTTCGATATAATTTCTCTTTCTGCCGGGCTTGACTTGTCTGGCCTTTTTGCAAGCATTGATGAACAGGATGGTGTAATGAAATTTACATCCATGAACTCTGCTTCATCAATCATTTCCACGTTGGAGAATATCGCTCAAGTTCTGGGGTTGAAGATAGCTAAGAAGGATGGAGGCCTGTTTAGACTAGAGAGATCCAGGGAAGGTAGGAAAGGGCCACTTTCCATTGATGTCGAAATATTCGAGTTTGCCCCCTCTTTCCATTTGGTTGAAATCAAGAGATCATGTGGTGATACAATAGAATACCAGAAGATATTGAAGGAAGATATAAAACCAGCTTTGAAAGATATTGTCTCAGTTTGGCAAGGTGAGCAGCAACAGCAATAG 1332 0.4227 MEKRGNVLMQKYEFGRLLGQGNFAKVYHARDLKTGDSVAIKVIDKEKILKVGMMDQTKREISIMRLVKHPNVLRLYEVLATKTKIYFIIEYAKGGELFNKVARGKLHEDMARRYFQQLISAVDFCHRRGVYHRDLKPENLLLDDNGVLKVADFGLSALVESHSQANMLQTVCGTPAYVAPEVISRKGYDGAKADVWSCGVILYVLLAGHLPFYDLNLMALYRKITKAEYKSPNWFSFEARRLLARILDPNPKTRISTAKVMESSWFRKGLNLRSDQKRREGPDSASADSDKVLGLCDSGSSSAEANQALVNYNLNAFDIISLSAGLDLSGLFASIDEQDGVMKFTSMNSASSIISTLENIAQVLGLKIAKKDGGLFRLERSREGRKGPLSIDVEIFEFAPSFHLVEIKRSCGDTIEYQKILKEDIKPALKDIVSVWQGEQQQQ* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1260 443 SUPERFAMILY Protein kinase-like (PK-like) 8 282 IPR011009 -
Ahy20g1260 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Ahy20g1260 443 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1260 443 CDD CIPK_C 315 430 - -
Ahy20g1260 443 Gene3D Transferase(Phosphotransferase) domain 1 3 315 - -
Ahy20g1260 443 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 441 - -
Ahy20g1260 443 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1260 443 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Ahy20g1260 443 PANTHER - 2 441 - -
Ahy20g1260 443 Gene3D Kinase associated domain 1, KA1 316 436 - -
Ahy20g1260 443 Pfam NAF domain 313 370 IPR004041 GO:0007165
Ahy20g1260 443 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Ahy20g1260 443 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1260 Ahy-Chr20 24726667 24728944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1260 1 442 CBL-interacting serine-threonine protein kinases AT5G58380 59.560 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Ahy20g1260 Pkinase 2.60E-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1260 K07198 - gmx:100816254 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1332 17 22143388 22145976 Ahy20g1260 20 24726667 24728944 ECH
Ahy14g2091 14 118288731 118292196 Ahy20g1260 20 24726667 24728944 ECH
Ahy11g0286 11 3182921 3185392 Ahy20g1260 20 24726667 24728944 ECH
Ahy20g1260 20 24726667 24728944 Ahy20g1260 20 24726667 24728944 ECH
Ahy20g1260 20 24726667 24728944 Ahy10g0927 10 16777563 16779918 hybridization