Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1252 ATGGAGCCCGAGCCACCGAGTCAGGGTAAAGGTGTTGTTGCAACTGGCCGAAAGTTGATTGGAGCAACAAACCCCTTGGCATCTGAGCTTGGAACTATTCATGGTGGTCTTGCATCGAATGTGCTTTCTATAGATCTTGCCATTCATGGTTGTAGTGGTCTATGTGTGTGGATCTTTTCTGATTGGAGTATTGAACATGTCAGTGGTGAAATTTTAACATTGTTTGATAAGTTACCAGATCATGGTTTCCTACAAGAAGACGAGATACCAAGAGTTGGAATGCGGTTTGATCAGTTACAGATGGCTCAAGACTTTTATGTTACCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACAACAACATTTGACAAGATCACAAAGGCTCCCGTTAACCAAGCTATACACTGTAATCGCGATGAGATCCACGAGTCTCGTGTTAAAGCACCAATGCGGAAGAATACAATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGACGTGCAAGACTGGGTTTTGTTCAAGGTTAACTTGATGCACTCACACCCCTGTTCACCGAGAAAGGCAGTGCACTACCATGAGTATAGGAAGCTGACCATGCATGCGAAGTGCGTGATCGAGGATAATGATGAGGCTGAGATTCGACCAAATAAGACATTCCTTGCTTTGTCAAATGAGGCTGGTGGCCCCTCTAACTTGGGATTCTCAGAGAAGGATTTAAAAAACTATATAACAGCAAGGCTCCGAACTAGCAACGTGAATGCGGATGTCAGGGAGATGATGAGCTACTTCATGAGAATGAAGGACATCAATCCAAACTTCTTTTACGCGGTGAAGTTGGACGAGGACTGTAAATTTAAGAGCGCAGTATGGGTTGATGCAAGGTGTAGGGCGTCGTATGAATACTATGGAGACGTCGTGTCAATTGATAGCACGCATGGATTACCGTTTGTGTCATTCGTTGGGGTCAACCACCATGGTAAGTCGACCCTCCTCGGTTGTGCTGTGTTGGGTAATGAGGAAATCACAAGTTATGAGTGGGTTTTTAGCCAATGGGTGAAGTGCATGGGAACTGCTCCACAGTGTATCATAACCGATCAATGTTGA 1125 0.4427 MEPEPPSQGKGVVATGRKLIGATNPLASELGTIHGGLASNVLSIDLAIHGCSGLCVWIFSDWSIEHVSGEILTLFDKLPDHGFLQEDEIPRVGMRFDQLQMAQDFYVTYAKKAGFATKIRTTTFDKITKAPVNQAIHCNRDEIHESRVKAPMRKNTISAAGCKARIYVKFDKDVQDWVLFKVNLMHSHPCSPRKAVHYHEYRKLTMHAKCVIEDNDEAEIRPNKTFLALSNEAGGPSNLGFSEKDLKNYITARLRTSNVNADVREMMSYFMRMKDINPNFFYAVKLDEDCKFKSAVWVDARCRASYEYYGDVVSIDSTHGLPFVSFVGVNHHGKSTLLGCAVLGNEEITSYEWVFSQWVKCMGTAPQCIITDQC* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1252 374 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 88 374 IPR031052 GO:0006355
Ahy20g1252 374 Pfam FAR1 DNA-binding domain 104 191 IPR004330 -
Ahy20g1252 374 Pfam MULE transposase domain 318 374 IPR018289 -
Ahy20g1252 374 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 88 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1252 Ahy-Chr20 24392675 24395449 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1252 FAR1 1.10E-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1252 - - aip:107615899 571.622