Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1233 ATGACGTCCCCTCTAGCTTCCTCTCCTTGCCATCCCCTGCGTCTTCTCCGCCAAAATCTCAGCGCCTCCCTTTCGTTCTGGATCAGAAAGGTTGGCTTACCTCTTTTAAGTAGTTTTCGAGGATTCATCGCGAGTGGTTCCACTGTTTGCGCAGCAAAATCAACAGCAACAGCAAGAATAAGATATTGTAGCTGCCCTTGCTGCTCAATGAAAGCTTTTGTTTATTATGGAATCGCGATTTTTCAGGAGATTGCTTTCTTTGATGTTACTCGAACGGGAGAAATCTTAAGTAGGTTGTCGGAAGATACACAGATCATAAAGAATGCCGCAACTACCAATGTTTCTGAGGCCATGAAGAACCTAGCAACAGCACTTACGGGTCTCAGCTTCATGTTTGCAACATCTTGGAAGTTAACATTGTTGGCTTTGGCTGTTGTGCCTGTAATTTCTGTTGCTGTCTGTAAATTTAGGCATTTCCTGCGTGAACTATCTCACAAAATTCAAACTGCAGCTGCAGTAGCATCTTCAATTGCTGAGGAATTGAATCAAGAGAGTGAGATTTCATCGCCAAAAGAGTTAGGAAGTAGGTCTTCTGGAGCAAGCAATAGAGCAGCATGA 618 0.4369 MTSPLASSPCHPLRLLRQNLSASLSFWIRKVGLPLLSSFRGFIASGSTVCAAKSTATARIRYCSCPCCSMKAFVYYGIAIFQEIAFFDVTRTGEILSRLSEDTQIIKNAATTNVSEAMKNLATALTGLSFMFATSWKLTLLALAVVPVISVAVCKFRHFLRELSHKIQTAAAVASSIAEELNQESEISSPKELGSRSSGASNRAA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1233 205 MobiDBLite consensus disorder prediction 182 205 - -
Ahy20g1233 205 Pfam ABC transporter transmembrane region 81 180 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g1233 205 Gene3D ABC transporter type 1, transmembrane domain 68 186 IPR036640 GO:0005524|GO:0016021
Ahy20g1233 205 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 82 180 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g1233 205 SUPERFAMILY ABC transporter transmembrane region 81 181 IPR036640 GO:0005524|GO:0016021
Ahy20g1233 205 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 80 180 IPR039421 -
Ahy20g1233 205 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 80 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1233 Ahy-Chr20 23340255 23344384 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1233 75 180 Calmodulin-binding Proteins AT2G36910 30.841 7.68e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1233 - - aip:107621923 228.024