Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1231 ATGACGTCCCCTCTAGCTTCCTCTCCTTGCCATCCCCTGCGTCTTCTCCGCCAAAATCTCAGCGCCTCCCTTTCGTTCTGGATCAGAAAGGTTGGCTTACCTCTTTTAAGTAGTTTTCGAGGATTCATCGCGAGTGGTTCCACTGTTTGCGCAGCAAAATCAACAGCAACAGCAAGAATAAGATATTGTAGCTGCCCTTGCTGCTCAATGAAAGCTTTTGTTTATTATGGAATCGCGATTTTTCAGGAGATTGCTTTCTTCGATGTTACTCGAACGGGAGAAATCTTAAGTAGGTTGTCGGAAGATACACAGATCATAAAGAATGTCGCAACTACCAATGTTTCTGAGGCCATGAAGAACCTAGCAACAGCACTTACGGGTCTCAGCTTCATGTTTGCAACATCTTGGAAGTTAACATTGTTGGCTTTGGCTGTTGTGCCTGTAATTTCTGTTGCTGTCTGTAAATTTAGGCATTTCCTGCGTGAACTATCTCACAAAATTCAAACTGCAGCTGCAGTAGCATCTTCAATTGCTGAGGAATTGAATCAAGAGAGTGAGATTTCATCGCCAAAAGAGTTAGGAAGTAGGTCTTCTGGAGCAAGCAATAGAGCAGCATGA 618 0.4369 MTSPLASSPCHPLRLLRQNLSASLSFWIRKVGLPLLSSFRGFIASGSTVCAAKSTATARIRYCSCPCCSMKAFVYYGIAIFQEIAFFDVTRTGEILSRLSEDTQIIKNVATTNVSEAMKNLATALTGLSFMFATSWKLTLLALAVVPVISVAVCKFRHFLRELSHKIQTAAAVASSIAEELNQESEISSPKELGSRSSGASNRAA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1231 205 MobiDBLite consensus disorder prediction 182 205 - -
Ahy20g1231 205 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 80 180 IPR039421 -
Ahy20g1231 205 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 82 180 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g1231 205 Pfam ABC transporter transmembrane region 81 180 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g1231 205 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 80 180 - -
Ahy20g1231 205 SUPERFAMILY ABC transporter transmembrane region 81 181 IPR036640 GO:0005524|GO:0016021
Ahy20g1231 205 Gene3D ABC transporter type 1, transmembrane domain 68 186 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1231 Ahy-Chr20 23214066 23218215 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1231 75 180 Calmodulin-binding Proteins AT2G36910 29.907 3.22e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1231 - - aip:107621923 229.565