Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1225 ATGACGTCCCCTCTAGCTTCCTCTCCTTGCCATCCCCTGCGTCTTCTCCGCCAAAATCTCAGCGCCTCCCTTTCGTTCTGGATCAGAAAGGAGATTGCTTTCTTCGATGTTACTCGAACGGGAGAAATCTTAAGTAGGTTGTCGGAAGATACACAGATCATAAAGAATGCCGCAACTACCAATGTTTCTGAGGCCATGAAGAACCTAGCAACAGCACTTATGGGTCTCAGCTTCATGTTTGCAACATCTTGGAAGTTAACATTGTTGCCTTTGACTGTTGTGCCTGTAATTTCTGTTGCTGTCTGTAAATTTAGGCATTTGCTGCGTGAACTATCTCACAAAATTCAAACTGCAGTTGCAGTAGCATCTTCAATTGCTGAGAAATCATTTGGTGCCATAAGAATAGTAAGATCTTTTGCTCAAGAAGATTATGAAATTTCATGCTACTTTGAGAAAGTTAGTGAGACACACAGCCTTGGCCTTAAGCAAGCTAAAGTCGTTGGACTCTTTTCTGGAGGCCTTAATGCAGCGTCCACACTTTCTGTTATCGTAGCAGTGGGATCTTCTATATCTTCTATATCTTTTTTGTTAATCACAACCTGTCTAATAAGACTAAATGGCTACCGGAAACCTGGTTTGATTGCATTGTTTGATGTTGATGTCACTCTTATAGCCCCAAGGAAGCTTTTTGAAGGTTTTTCTTTGTCTCTTCAAGCTCAGCTTCAATGGCTTCATGCCTCAGTTGTTGCAGCTGAATCTTTAGCTCTGACCCTGCAAGCATCTTGCAATTTAAAAGATTCAAAAGAACTTTTTGAAAGGAATTGA 825 0.4121 MTSPLASSPCHPLRLLRQNLSASLSFWIRKEIAFFDVTRTGEILSRLSEDTQIIKNAATTNVSEAMKNLATALMGLSFMFATSWKLTLLPLTVVPVISVAVCKFRHLLRELSHKIQTAVAVASSIAEKSFGAIRIVRSFAQEDYEISCYFEKVSETHSLGLKQAKVVGLFSGGLNAASTLSVIVAVGSSISSISFLLITTCLIRLNGYRKPGLIALFDVDVTLIAPRKLFEGFSLSLQAQLQWLHASVVAAESLALTLQASCNLKDSKELFERN* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1225 274 Pfam ABC transporter transmembrane region 29 191 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g1225 274 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 27 187 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g1225 274 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 16 186 - -
Ahy20g1225 274 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 16 186 IPR039421 -
Ahy20g1225 274 SUPERFAMILY ABC transporter transmembrane region 27 197 IPR036640 GO:0005524|GO:0016021
Ahy20g1225 274 Gene3D ABC transporter type 1, transmembrane domain 14 212 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1225 Ahy-Chr20 23040782 23047555 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1225 28 183 Calmodulin-binding Proteins AT2G36910 27.500 2.33e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1225 - - ahf:112722681 490.73