Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1214 ATGGCTTCTTCAGCAATGATACCTACCTGCATATCCTCGTCAAAGGATATGCAGGTCGACATTGAGAAGAACCAAAGCCATGTAAGGTGTCAGTGGGTACTCAACCCTCCTGAGCCACCGAGTCCTTGGCGCATGATCACGGACTCAGTGGAAAAAAGTATCTTGCGTTGGCGCAAGAACTTTTCTACGCTGGGACATGAATCATGGGCCAGGGTCATGTTTTCAACTTTGCAGAGGATTTTTCCGATCCTTGTGTGGGGAAGAAGTTACACTGCCACTAAATTCAGGAAAGACTTGCTTGCTGGTCTCACTATTGCGAGTCTCTGTATTCCCCAGAGCATTGGGTACGCGACCTTAGCAAACCTTGATCCTCAATATGGCCTTTATACAAGTGTTGTGCCACCGCTGATCTATGCCGTAATGGGAACCTCTCAAGAGATAGCAATGGGGCCAGTGGCGGTGGTGTCGTTGCTCTTGTCTTCGATGGTTCAGAAATTAAGAGATCCTGTTTTTGATCCAATCGCTTACACCAAACTCGTCTTGCTTGCCACTCTCTTTGCTGGTATTTTTCAGACCGCCTTTGGCCTTTTCAGGCTGGGGTTCCTTGTGGATTTCCTGTCACACGCAGCAATAGTTGGATTTGTGGGAGGAGCAGCCATTGTTATTGGCCTTCAACAGTTGAAGGGCCTCTTAGGAGTTTCTCACTTTACTACCAAAACCGACATTATCTCTGTCATCAAAGCTGTTTGGCAAGCAACTCATCATCCCTGGAATCCTCGCAATTTCATACTAGGATGCTCATTCCTGGTCTTCATCCTATCTACTAGATTTCTGGGTAAAAAGAAGAAGAAGCTGTTCTGGTTGGCATCAATTTCCCCTCTCATATCAGTTGTAGTATCAACTTTACTGGTTTTTGTGACACATGCTGATAAGAATGGAGTTAAAATTGTAAAACATGTCAAAGGGGGATTAAATCCAAGCTCCATTCATATGTTGGATTTCAATAATCCATATGTTGGAGAAGTCGCCAAAATTGGACTAATCCTTGCTGTTGTTGCCCTCACTGAATCTGTTGCTGTTGGACGGTCTTTCGCATCCATCAAAGGGTACCAACTTAATGGGAACAAGGAAATGGTGTCAATTGGAATCACCAACATCATAGGATCTTTCACCTCTTGCTATGTTGCTACTGGTTCATTCTCCCGAACGGCGGTGAATTATGCAGCTGGATGTGAAACATTGGTGTCAAACATAGTGATGGGAATGACAGTGTTGATATCGTTGCAGTTCATGACAAAGCTTTTGTATTACACACCAACTGCCATTCTTGCTTCGGTCATCCTTTCAGCACTGCCAGGCCTCATAGATATCAATGAAGCTCTCAGAATATGGAAGCTTGATAAGTTTGACTTTCTTGCTTGTCTTAGTGCCTTCTTTGGTGTACTCTTTGCATCTGTGGAGATTGGTCTTCTTGTTGCGGTGGCAGTATCGTTTTCAAAGATAATTGTGATATCAATACGACCAGGGACAGAAACTCTAGGAAAATTACCGGGAACCGATTTGTTCGGTGATGTTAATCAGTATCCAATGGCTGTTAAGATCCCTGGCCTTCTCATTATACGTCTTAAGTCTGCCTTGCTTTGCTTTGCAAATGCCACTTTCGTTAGAGAAAGGATCATGAAATGGGTCAGTGAGGAAGAAGAATCGATGGATGACAAGGGAAATGCAATAAGCCAAATTCAATTCGTAATCCTTGACATGTCCAATTTGGTGAACATTGACACATCTGGAATTGCTGCTCTTGAGGAACTGCACAAGAGTTTGTCCTCACATAGGAAGCAGTTAGCCATTGCGAACCCAAGGTGGCAAGTGATTCACAAGCTAAAGGTATCAAACTTTGTCAACAAAATCAATGGCAGGGTCTTTCTCACTGTTGAAGAAGCTGTTAGCTCCAAGATCCAGTGCTGA 1968 0.439 MASSAMIPTCISSSKDMQVDIEKNQSHVRCQWVLNPPEPPSPWRMITDSVEKSILRWRKNFSTLGHESWARVMFSTLQRIFPILVWGRSYTATKFRKDLLAGLTIASLCIPQSIGYATLANLDPQYGLYTSVVPPLIYAVMGTSQEIAMGPVAVVSLLLSSMVQKLRDPVFDPIAYTKLVLLATLFAGIFQTAFGLFRLGFLVDFLSHAAIVGFVGGAAIVIGLQQLKGLLGVSHFTTKTDIISVIKAVWQATHHPWNPRNFILGCSFLVFILSTRFLGKKKKKLFWLASISPLISVVVSTLLVFVTHADKNGVKIVKHVKGGLNPSSIHMLDFNNPYVGEVAKIGLILAVVALTESVAVGRSFASIKGYQLNGNKEMVSIGITNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMGMTVLISLQFMTKLLYYTPTAILASVILSALPGLIDINEALRIWKLDKFDFLACLSAFFGVLFASVEIGLLVAVAVSFSKIIVISIRPGTETLGKLPGTDLFGDVNQYPMAVKIPGLLIIRLKSALLCFANATFVRERIMKWVSEEEESMDDKGNAISQIQFVILDMSNLVNIDTSGIAALEELHKSLSSHRKQLAIANPRWQVIHKLKVSNFVNKINGRVFLTVEEAVSSKIQC* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1214 655 ProSiteProfiles STAS domain profile. 547 652 IPR002645 -
Ahy20g1214 655 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 19 653 - -
Ahy20g1214 655 Gene3D STAS domain 507 653 IPR036513 -
Ahy20g1214 655 Pfam Sulfate permease family 95 475 IPR011547 GO:0016021
Ahy20g1214 655 Pfam STAS domain 528 648 IPR002645 -
Ahy20g1214 655 TIGRFAM sulP: sulfate permease 82 645 IPR001902 GO:0015301|GO:0016020|GO:0055085
Ahy20g1214 655 SUPERFAMILY SpoIIaa-like 532 650 IPR036513 -
Ahy20g1214 655 PANTHER SULFATE TRANSPORTER 19 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Ahy20g1214 655 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1214 Ahy-Chr20 22605699 22638052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1214 3 651 Inorganic Solute Cotransporters AT5G10180 66.410 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1214 K17469 - gmx:100817831 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1214 20 22605699 22638052 Ahy10g0899 10 14781438 14809965 hybridization