Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1213 ATGGTAGCTTCATCAGTAAGCAGTGCCGCAGTGAGTTGCACGTTGGAAGAGATGTTGGAATCTAAAGAGAAAGAAATGTACCAGCAGCAGTGGGTGCAAAATGCACCACACCCGCCTTGTTTTTTTCGAGAGGTATTCGAAAACGTTAGGGACACAATTTTGCCGCCTAGTAACAGCAAGAATGTGTGGTCAACTCTCGTTGTCAACGACAACCAACAACCTTTGTACAAAAGAGCGTTGGTGTTGTTGACGGAGATTTTTCCCATCCTTGCTTCTCTAAGAGGATACAATGCTCACAAGTTCAAATTCGATCTCATGGCGGGTATAACCGTTGCAAGTCTCGCCATTCCTCAGTGTGTAGGATTCGCTACTTTGGCTCAGCTAAGTCCCGAATATGGTTTATATACATGTTTTGGGCCACCTCTTATGTACGCAATGCTTACGAGTTCAAGGGAGATAGTGATTGGGAATGTAGCAGTGGATTCACTTCTTCTTTCTTCAATGATTTCCAAATTGAAAGATCCCATTCAAGATTCTGTTGCATACACTCAGCTACTTCTAACTGCAACTTTCATTGCTGGTATCTTCCAACTTGCATTTGGAATCTTCAGGTTTGGATTTCTGGTGGATTATCTTTCCCATGCAACAATAGTGGGGTTCTTGGCAGCAGCTGCCGTAGGCATTGGAGCATATCAGTTTATAGTGTTGTTAGGAATCAATAAATTCACTAACAAATCTGACTTGATTTCTGTGATCAAAATATTTTGGACATCTTTATTCAAGGATCGATCACAGTGGCATCCTTACAGCTTTACTCTTGGATTCTCATTTCTTTGTTTCATCCTATTTGCCAGATTCATGGGGAGAAGGAACAAGAAACTGTTCTGGTTGCCAACAATTGCTCCTCTGCTTTCAGTTATTGTATCTTCTATTGTTGCATATACAGTGAATTCTCATCAAATAAATGTGAAGGACTACAAAGTTGATGTGTTAGGAGAAATCAAAGGAGGTAGCTTGAACCCAATCTCATTATTGCATCTCAACCTTAGTGACAATTTTTTGGCTCCATTGATCAAAACAGGGTTAACCGTTGCTGTTATTTCACTCACGGAAACTATTGCCGTTGGTAGGTCATTTGCATCCATAAGAGGATACAATCTTGATCCCAATAAAGAAATGATATCCCTGGGTTTAACCAACATTGTTGGATCTTTCACGTCTTGTTACGTTGCATCTGGTTCACTTTCACGCACTGCTCTAAATTATAGTTCAGGGGCTGAAACAACGGTGTCAAGCATAGTGATGGCATTGACGGTTCTAATATCACTGAAATTCTTGACGAGGCTATTGTATTACACTCCAAAAGCAATCTTAGCAGCAATAATTATATCGATAGTGCCTGGTCTTATTGACATTCAAAAAGCATATCAGATTTGGAAGGTTGATAAACTAGACTTTCTTGCTTGCGCTGCAGCCTTTTTTGGGGTCCTCTTTGCCTCTGTAGAGATGGGCCTTGCAATTGCGGTGACAATATCATTTGCAAAGTTAATTCTGGTGTCAATTCAACCTGGAATAACGGTTCTTGGAAGGCTTCCTGGAACAGATGGATTTGGTGACATTGAGCAATATCCAATGGGCCTCTCCATTCCTGGCCTTCTTATTCTTTCTCCAAAATCCTCCTTCCTTTCTTTTGCAAATGCAACTCTTGTCAGAGAAAGGATTGAGAGATGGGTGAATGATGGACACGTTGAGGAGGGCGAGGGAGGAAGCAATTTAAAATTCATCATTCTTGATTCCTCAGGTCTTACGAATATTGACACAGCGGGAATTGCTTCTTTGGAGGAACTGAACAAGAATTTGACTTCACATGGAGTAAAGTTGGTGATAGCTAACCCAAGGTGGCAAGTAATCCACAAGCTAAGAGTAGGTGACTTTGTGAGCAAAATTGGAGGAAGAGTTTTCGTTTCTGTGGGTGAAGCTGTAGATGCATGTCTTGGTCTTGGTGCTGCCAAAATGGCTAATACTGTATAA 2031 0.4121 MVASSVSSAAVSCTLEEMLESKEKEMYQQQWVQNAPHPPCFFREVFENVRDTILPPSNSKNVWSTLVVNDNQQPLYKRALVLLTEIFPILASLRGYNAHKFKFDLMAGITVASLAIPQCVGFATLAQLSPEYGLYTCFGPPLMYAMLTSSREIVIGNVAVDSLLLSSMISKLKDPIQDSVAYTQLLLTATFIAGIFQLAFGIFRFGFLVDYLSHATIVGFLAAAAVGIGAYQFIVLLGINKFTNKSDLISVIKIFWTSLFKDRSQWHPYSFTLGFSFLCFILFARFMGRRNKKLFWLPTIAPLLSVIVSSIVAYTVNSHQINVKDYKVDVLGEIKGGSLNPISLLHLNLSDNFLAPLIKTGLTVAVISLTETIAVGRSFASIRGYNLDPNKEMISLGLTNIVGSFTSCYVASGSLSRTALNYSSGAETTVSSIVMALTVLISLKFLTRLLYYTPKAILAAIIISIVPGLIDIQKAYQIWKVDKLDFLACAAAFFGVLFASVEMGLAIAVTISFAKLILVSIQPGITVLGRLPGTDGFGDIEQYPMGLSIPGLLILSPKSSFLSFANATLVRERIERWVNDGHVEEGEGGSNLKFIILDSSGLTNIDTAGIASLEELNKNLTSHGVKLVIANPRWQVIHKLRVGDFVSKIGGRVFVSVGEAVDACLGLGAAKMANTV* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1213 676 SUPERFAMILY SpoIIaa-like 550 664 IPR036513 -
Ahy20g1213 676 PANTHER SULFATE TRANSPORTER 16 667 IPR001902 GO:0015301|GO:0016020|GO:0055085
Ahy20g1213 676 Gene3D STAS domain 522 665 IPR036513 -
Ahy20g1213 676 Pfam Sulfate permease family 101 491 IPR011547 GO:0016021
Ahy20g1213 676 Pfam STAS domain 549 660 IPR002645 -
Ahy20g1213 676 ProSiteProfiles STAS domain profile. 562 664 IPR002645 -
Ahy20g1213 676 TIGRFAM sulP: sulfate permease 88 658 IPR001902 GO:0015301|GO:0016020|GO:0055085
Ahy20g1213 676 CDD STAS_SulP_like_sulfate_transporter 543 654 - -
Ahy20g1213 676 PANTHER EARLY NODULIN-70 16 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1213 Ahy-Chr20 22516846 22528431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1213 2 667 Inorganic Solute Cotransporters AT5G10180 52.239 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1213 K17469 - gmx:100817841 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1213 20 22516846 22528431 Ahy10g0898 10 14744798 14753884 hybridization