Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1201 ATGGAAACCAGCAGCACCCACAATGGGAGTAGCATGATGTGGTTTTTCAAGGATAGAGGGCTTGATGATAATAGCATACAAGGAATTTTCAGAAGGTGCAAACGCCTTGAGAGTGTTAACAAAGAGAGAGCAAATGAGAATTGGGAATACTTGAGAAGCATTGGAATTCAAGAAAGAAAGATTCCATCTGTTGTTTCGAAATGCCCCAAGATCCTCGCTCTCGGCCTCAATGAGAAGATTGTCCCCATGGTTGAGTGTCTCAGGACATTAGGAACAAAGCCCCATGAAGTCACCTCTGCCATAGCCAAGTTCCCTCACATACTCTCACACAGTGTCGAAGAGAAACTTTGTCCCCTTTTGGCCTTCTTTCAGGCGTTAGGCATACCCGAGAAGCAACTAGGGAAGGTGATACTGCTCAATCCTCGGCTTATCAGCTACAGCATCGAAACAAAGCTGAAGGAGATTGTGGACTTCCTTGCTAGCCTTGGTCTAAATAAAGATGGAATGATTGGAAAAGTCATAGTCAAGGACCCGTTTATAATGGGTTATAGTGTTGATAAGAGACTCCGACCAACTTCAGAGTTTCTGAGGTCAATAGGCCTGAGTGAGTTAGATCTTCAGGCGGTGGCTGTGAACTTCCCAGCAATCTTAAGTAGAGATGCGAAAAAGGTTTTGATGCCCAATTATGATTTCTTAAAGAAATGCGGATTTCAAGACAAACAAATAGCTGCTTTGGTTGTTGGTTTTCCTCCTATTCTGATCAAGAGCATACAGAACTCTTTAGAGCCCAGGATTGGATTTTTAGTGGACGTGATGGGGAGACAAGTGGATGAAGTCGTTGATTATCCCTGCTTCTTTCGTCATGGCCTGAAGAGAAGATAA 882 0.4365 METSSTHNGSSMMWFFKDRGLDDNSIQGIFRRCKRLESVNKERANENWEYLRSIGIQERKIPSVVSKCPKILALGLNEKIVPMVECLRTLGTKPHEVTSAIAKFPHILSHSVEEKLCPLLAFFQALGIPEKQLGKVILLNPRLISYSIETKLKEIVDFLASLGLNKDGMIGKVIVKDPFIMGYSVDKRLRPTSEFLRSIGLSELDLQAVAVNFPAILSRDAKKVLMPNYDFLKKCGFQDKQIAALVVGFPPILIKSIQNSLEPRIGFLVDVMGRQVDEVVDYPCFFRHGLKRR* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1201 293 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Ahy20g1201 293 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Ahy20g1201 293 SMART mt_12 27 57 IPR003690 GO:0003690|GO:0006355
Ahy20g1201 293 SMART mt_12 243 275 IPR003690 GO:0003690|GO:0006355
Ahy20g1201 293 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Ahy20g1201 293 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Ahy20g1201 293 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Ahy20g1201 293 Pfam mTERF 105 292 IPR003690 GO:0003690|GO:0006355
Ahy20g1201 293 Pfam mTERF 4 167 IPR003690 GO:0003690|GO:0006355
Ahy20g1201 293 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 11 293 - -
Ahy20g1201 293 Gene3D Transcription termination factor 3, mitochondrial 96 293 IPR038538 -
Ahy20g1201 293 PANTHER CGI-12 PROTEIN-RELATED 11 293 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1201 Ahy-Chr20 21855550 21861099 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy20g1201 mTERF 5.00E-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1201 K15032 - gmx:100816929 501.13