Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1162 ATGAGAGGTTTTTGTTGCTCAAGTAGTAGAGGTCTTAGATATCTGCAAAGCAATGAAGCAAGCAAACCTACAATGGTTCACCAAAATATTTTAGTTGAAAAAGTTCTTCTTGACAATCAGTTTAACCCATTGATCATGGATGCTGGGTTCCCCAAGCTTCTAGCAGACGACAATGTTTATTCGGCACCGAAAGTTGGTGCTGCCATGGGATACCTAGCTCTTGAATACATTACCACTGGACGCATCACTGAGACGAGCGACGTTTATGCATTCGGTGTCATTGTTCTTCAAGTCCTGTCTGGAAAGACAACAGTACGGGGTTCAATCAGAATGGCAGTTGAGTTTTTGAGATTTGATGATTTTGTGGACACAAATCTAAAGAAAAAATATTCGAAACTAGAAGCAGCAATTCTTTCAAAGATTGCAGTGATGTGCATTCATAAGCTTTCTGAGCAAAGGCCAAAATGGTAG 471 0.4034 MRGFCCSSSRGLRYLQSNEASKPTMVHQNILVEKVLLDNQFNPLIMDAGFPKLLADDNVYSAPKVGAAMGYLALEYITTGRITETSDVYAFGVIVLQVLSGKTTVRGSIRMAVEFLRFDDFVDTNLKKKYSKLEAAILSKIAVMCIHKLSEQRPKW* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1162 156 SUPERFAMILY Protein kinase-like (PK-like) 4 155 IPR011009 -
Ahy20g1162 156 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 9 155 - -
Ahy20g1162 156 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 155 - -
Ahy20g1162 156 ProSiteProfiles Protein kinase domain profile. 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1162 156 Gene3D Transferase(Phosphotransferase) domain 1 1 156 - -
Ahy20g1162 156 Pfam Protein tyrosine and serine/threonine kinase 4 155 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1162 Ahy-Chr20 19787686 19789397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1162 2 154 Receptor kinase-like Gene Family AT1G53420 34.146 8.14e-25 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Ahy20g1162 PK_Tyr_Ser-Thr 3.00E-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1162 - - aip:107622412 310.071