Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1159 ATGGAGAGGTACAAGTTAATTAAGGAAGTTGGTGATGGATCGTTTGGGAGTGTTTGGAGAGCTATTAATAAGCAAACTGGAGAAGTTGTTGCAATTAAAATAATGAAGAAGAACTATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCACTAAGACAAATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCTAGAAAGCGAAATTCTGTACTTTGTTTTTGAGTACATGGAATGCAACCTGTACCAACTTATGAAAGACAGGGAGAAGATGTTTTCTGAGGGTGAAGTTAGGAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTATATGCATCAGCGTGGATACTTCCACCGTGATCTGAAGCCTGAGAACTTGCTGGTTATCAAGGATATCATAAAAATTGCTGATCTTGGCCTAGCACGTGAGATCAGTTCAGAACCACCCTACACTGATTATGTCTCCACACGCTGGTATCGTGCTCCTGAAGTGCTACTTCAATCTTATGTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTATTGTCTCTTCGTCCTCTTTTCCCTGGTGCCAGTGAAGCGGATGAGATCTACAAAATATGCGGTGTGATAGGCAGCCCAACTATTGAATCATGGGCTGATGGGCTGAAACTTGCAAGGGATATAAACTATGAGTTCCCACAACTTGCTGGTGTGCATCTTTCGGCACTGATACCATCTGCGAGTGACGATGCAGTCAGCCTTATCAGGTCGCTTTGCTCATGGGATCCCTGCAAGAGGCCAACAGCTGCACAGGCCCTTCAACATCCCTTTTTCCGGACTTGTTTTTACGTTCCTCCATCCCTTCGTACTAGAGCAGTGTCGAGAACTCCTCCATCTCAGCAAGGGGTTAGGAGATATTCTAGCATGTTACCTAATTCAAAGCTCACCAATAACTTCTCTTCTCCGAAATTACATCTTCCTTTAGCTTTGGATACGGTGAATCAGAATGAAAGTAAGAATGAGAAGTCCATGAATACTGTTCAACAATCAAAATATCGACAGCCTGGAAAGGAAAGCCCAACTTCTATGAATCTTGGTAGCCGCCCAACTCCAATGAAGGATGGAGTTAATTGGATTTCTGAATCTGGAAACTTCATGCTGAGAGCTGCACAGCCGATCCTCACCGGAAGAATTTTCAGTTAA 1218 0.4302 MERYKLIKEVGDGSFGSVWRAINKQTGEVVAIKIMKKNYYSWEECVNLREVKSLRQMNHPNIVKLKEVILESEILYFVFEYMECNLYQLMKDREKMFSEGEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVIKDIIKIADLGLAREISSEPPYTDYVSTRWYRAPEVLLQSYVYSSKVDMWAMGAIMAELLSLRPLFPGASEADEIYKICGVIGSPTIESWADGLKLARDINYEFPQLAGVHLSALIPSASDDAVSLIRSLCSWDPCKRPTAAQALQHPFFRTCFYVPPSLRTRAVSRTPPSQQGVRRYSSMLPNSKLTNNFSSPKLHLPLALDTVNQNESKNEKSMNTVQQSKYRQPGKESPTSMNLGSRPTPMKDGVNWISESGNFMLRAAQPILTGRIFS* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1159 405 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1159 405 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1159 405 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 301 - -
Ahy20g1159 405 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Ahy20g1159 405 CDD STKc_MAK_like 4 283 - -
Ahy20g1159 405 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 2 301 - -
Ahy20g1159 405 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Ahy20g1159 405 Gene3D Transferase(Phosphotransferase) domain 1 84 293 - -
Ahy20g1159 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Ahy20g1159 405 MobiDBLite consensus disorder prediction 342 373 - -
Ahy20g1159 405 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Ahy20g1159 405 MobiDBLite consensus disorder prediction 342 376 - -
Ahy20g1159 405 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1159 Ahy-Chr20 19747673 19748967 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1159 1 290 Core Cell Cycle Gene Families AT3G48750 37.584 2.93e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Ahy20g1159 Pkinase 6.90E-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1159 K08829 - gmx:100810150 682.559