Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1158 ATGGAGAGGTACAAGTTAATTAAGGAAGTTGGTGATGGATCGTTTGGGAGTGTTTGGAGAGCTATTAATAAGCAAACTGGAGAAGTTGTTGCAATTAAAATAATGAAGAAGAACTATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCACTAAGACAAATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCTAGAAAGCGAAATTCTGTACTTTGTTTTTGAGTACATGGAATGCAACCTGTACCAACTTATGAAAGACAGGGAGAAGATGTTTTCTGAGGGTGAAGTTAGGAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTATATGCATCAGCGTGGATACTTCCACCGTGATCTGAAGCCTGAGAACTTGCTGGTTATCAAGGATATCATAAAAATTGCTGATCTTGGCCTAGCACGTGAGATCAGTTCAGAACCACCCTACACTGATTATGTCTCCACACGCTGGTATCGTGCTCCTGAAGTGCTACTTCAATCTTATGTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTATTGTCTCTTCGTCCTCTTTTCCCTGGTGCCAGTGAAGCGGATGAGATCTACAAAATATGCGGTGTGATAGGCAGCCCAACTATTGAATCATGGGCTGATGGGCTGAAACTTGCAAGGGATATAAACTATGAGTTCCCACAACTTGCTGGTGTGCATCTTTCGGCACTGATACCATCTGCGAGTGACGATGCAGTCAGCCTTATCAGGTCGCTTTGCTCATGGGATCCCTGCAAGAGGCCAACAGCTGCACAGGCCCTTCAACATCCCTTTTTCCGGACTTGTTTTTACGTTCCTCCATCCCTTCGTACTAGAGCAGTGTCGAGAACTCCTCCATCTCAGCAAGGGGTTAGGAGATATTCTAGCATGTTACCTAATTCAAAGCTCACCAATAACTTCTCTTCTCCGAAATTACATCTTCCTTTAGCTTTGGATACGGTGAATCAGAATGAAAGTAAGAATGAGAAGTCCATGAATACTGTTCAACAATCAAAATATCGACAGCCTGGAAAGGAAAGCCCAACTTCTATGAATCTTGGTAGCGGTACTCGAAGACATTCTATAGGACAACCCCGCCCTCCTCCAATGAAGGATGGAGTTAATTGGATTTCTGAATCTGGAGACTTCATGCTGAAAGCTGCACAGCCGATCCTCACCGGAAGAACTTTCAGTTAA 1248 0.4327 MERYKLIKEVGDGSFGSVWRAINKQTGEVVAIKIMKKNYYSWEECVNLREVKSLRQMNHPNIVKLKEVILESEILYFVFEYMECNLYQLMKDREKMFSEGEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVIKDIIKIADLGLAREISSEPPYTDYVSTRWYRAPEVLLQSYVYSSKVDMWAMGAIMAELLSLRPLFPGASEADEIYKICGVIGSPTIESWADGLKLARDINYEFPQLAGVHLSALIPSASDDAVSLIRSLCSWDPCKRPTAAQALQHPFFRTCFYVPPSLRTRAVSRTPPSQQGVRRYSSMLPNSKLTNNFSSPKLHLPLALDTVNQNESKNEKSMNTVQQSKYRQPGKESPTSMNLGSGTRRHSIGQPRPPPMKDGVNWISESGDFMLKAAQPILTGRTFS* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1158 415 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Ahy20g1158 415 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1158 415 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Ahy20g1158 415 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Ahy20g1158 415 CDD STKc_MAK_like 4 283 - -
Ahy20g1158 415 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 390 - -
Ahy20g1158 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Ahy20g1158 415 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1158 415 Gene3D Transferase(Phosphotransferase) domain 1 84 293 - -
Ahy20g1158 415 MobiDBLite consensus disorder prediction 342 376 - -
Ahy20g1158 415 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 390 - -
Ahy20g1158 415 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1158 415 MobiDBLite consensus disorder prediction 342 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1158 Ahy-Chr20 19738139 19739440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1158 1 290 Core Cell Cycle Gene Families AT3G48750 37.584 5.18e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Ahy20g1158 Pkinase 7.50E-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1158 K08829 - gmx:100810150 701.049