Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1141 ATGGATAGTGGCAGCGAAGGGAACTCGGACTTTTCGGGTCAATGGACCGATGGATGGAGTAGTGAGTCCGAAGAGGAAGAGGAAGAGGTGTCTAAGGGGTTAGAGTCACCGTCACGAGTGGGCAAGGATAATGAGCCGGTAGAGAGAGTTGATGTATTTGGTGAAGGGGACAATGGTGGCAGAATGCCTTCATCGGAGTCACCACGTGGTTCAGGCGATCAAATGAGTGATGATGTGGACACTTCGATGCTTTCAACCGCGGCTGCATTGGCCGATGCCGAATTTCATGGGGTTGAAGAGGCTTATGCAAGATATGTGGAGTATGCAAAGGCGACTGGATTTGCGATTCGAAAAGGGGATTCCATTAAAGATGATGAAGGCAATGTTGTGAGGAAATTTTTCTATTGCAATCGACAGGGCTTGCAGGAGAAGAAGCATTATGAGAGGGCGGATAGGAAAAGGGCGCATAAGGCAGAGACTAGGACCAACTGTAGTGCGAAGTTCATTGTATTTTTAGACAAACAGTGTGGCAAGTGGAGGACGAAGATATTTGTTCAAGATCACAATCATGATTTGACTTTGCCTGCTTTCACTAACGTGATGGCAGCTCACCGCAATATCAACGAAGGTGATAAAGCCCACATTCATAGTATGCACGAAGCAGGATTCCAAACCAATCAGATCATGGGGTTCTTTTCATATTTGTCCGGGGGTTATCGAAACTTGCACTTCATAAAGAAGGATGTTTACAACTATATCGACAATGTACGTCGCTCTCGGATTGTTCAGGGCGATGCGGCAGCAGCAATAAGTTATCTGAAGGGAAAAACCGAGATGGATCCATTAGCTGTTGTGATGTACACATATTGTCCCGAAAACCACCTTGGTCATCTGTTTTGGTCAGACGGAGCAATGCAGTATGACTATGAGTGCTTTGGTGACGTGTTGGCATTTGATTCGACATATAGGAAGAATCTATACAACCAGCCTTTAGTAATATTTTCTGGCACTAATCACCACCGACAGACAATAATTTTTAGTTTCGGGTTGTTGGAGGATGAGAAAATTCCATCTTATAAGTGGCTGCTAGGCACTTTCCTTGAGGTCATGCATCAAAAACAGCCCAAAGTTTTGGTTATAGATAGATACGAGTCAATGAAGGAGGCTATTAGGACAGAATTCCCTAATGCCACGCATCGACTTTGCACCTGGCACTTAGCGCGGAATGCTGTTTCAAACATCAAGGATAATGATTTTTGTTCTGCTTTTAAGACTGCTGTGTATGGTCATTTTGAGGTAGAGGAGTTTGATCAATATTGGGCAGACATGGTTGCTGCATTCGGGTTACAGGAGAACAAATGGATTTGGGCAACGTACGAGAAGAGGGTACATTGGAAAAATGCGTATTTGTGTGATACGTTTTGTGCTGGGTTGAGAACGACGTCAAGATGCGAGGGTATTAATGCATCGCTTAAAAGGTTTATCAAGTCCTCGAATTGTTTGTTGGAGTTGGTCGAGAATCTTGAACGTGTGGTTAAGGACTACAGGAATAATGAGTTTATCGCGGATTATAAATCTCTATATTCAGAACCGGTCATAACCACTGGGTTGGAATCAATTGAGAGGGCCATGTCACAAATCTACACTAGAGAGATATTTTTCGAGGTTAAGAAACAGATTGAAGGGGTGGCTGCGTTGATAGTTCTTCATAGGGAGAGTTATGGTAGCACAGAGAAATTCATGTTTAGAAAGTTTCGTAAGCCCCGTCGGGTTTACTCTGTACTGTATGAAAGCAACTCTGAAAGGTATGAGTGTTCTTGCAAGCTTTGGAACAGCATAGAAATTCCATGCAGCCATATCATCTGTGTTTTGAAAGAGCTGGAGAAGGATGCCTTGCCAATGCGGTTGGTGCTGAAAAGGTGGTGCAAAAATGCTAAGTCTGGATCATTCCACGACTCGGACGGAGGTTTGGATAGTAATAGAGCATTTCGAGGGCGATATGGTTCATTGTGGACTTCTTTCCTCCCTATGTGTTTGTTAGCGGCTCAACGGCCTGCCACGTACAAGTACGCTGCTGCCAAGATAGCGCAGCTATTAAAAGAGATTGAAGCGGAAGTTTCGAAGGGTAACAGTTCAACTTTCGTGCATGATACTGTAGATGGTGAAGATATTTTAGATCCAAAGATTATCAAGTCAAAAGGTGCACCGCGGTCAACCGGCAACGGCAAAATGGCTAGGCGATGCAAGCGCGGCCACGGTTTTGGACATGATCGGCGAAATTGCACAGCAAACAAGGAGGACATGTTAGATGAGGTTAGTGTTAAATTTAAAGTCGCCATTGGTAGTGTTACCGTATGA 2358 0.4432 MDSGSEGNSDFSGQWTDGWSSESEEEEEEVSKGLESPSRVGKDNEPVERVDVFGEGDNGGRMPSSESPRGSGDQMSDDVDTSMLSTAAALADAEFHGVEEAYARYVEYAKATGFAIRKGDSIKDDEGNVVRKFFYCNRQGLQEKKHYERADRKRAHKAETRTNCSAKFIVFLDKQCGKWRTKIFVQDHNHDLTLPAFTNVMAAHRNINEGDKAHIHSMHEAGFQTNQIMGFFSYLSGGYRNLHFIKKDVYNYIDNVRRSRIVQGDAAAAISYLKGKTEMDPLAVVMYTYCPENHLGHLFWSDGAMQYDYECFGDVLAFDSTYRKNLYNQPLVIFSGTNHHRQTIIFSFGLLEDEKIPSYKWLLGTFLEVMHQKQPKVLVIDRYESMKEAIRTEFPNATHRLCTWHLARNAVSNIKDNDFCSAFKTAVYGHFEVEEFDQYWADMVAAFGLQENKWIWATYEKRVHWKNAYLCDTFCAGLRTTSRCEGINASLKRFIKSSNCLLELVENLERVVKDYRNNEFIADYKSLYSEPVITTGLESIERAMSQIYTREIFFEVKKQIEGVAALIVLHRESYGSTEKFMFRKFRKPRRVYSVLYESNSERYECSCKLWNSIEIPCSHIICVLKELEKDALPMRLVLKRWCKNAKSGSFHDSDGGLDSNRAFRGRYGSLWTSFLPMCLLAAQRPATYKYAAAKIAQLLKEIEAEVSKGNSSTFVHDTVDGEDILDPKIIKSKGAPRSTGNGKMARRCKRGHGFGHDRRNCTANKEDMLDEVSVKFKVAIGSVTV* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1141 785 MobiDBLite consensus disorder prediction 1 19 - -
Ahy20g1141 785 MobiDBLite consensus disorder prediction 64 79 - -
Ahy20g1141 785 Pfam FAR1 DNA-binding domain 105 193 IPR004330 -
Ahy20g1141 785 Pfam MULE transposase domain 315 409 IPR018289 -
Ahy20g1141 785 MobiDBLite consensus disorder prediction 1 79 - -
Ahy20g1141 785 PANTHER OS02G0262500 PROTEIN 89 745 - -
Ahy20g1141 785 Coils Coil 498 518 - -
Ahy20g1141 785 MobiDBLite consensus disorder prediction 731 751 - -
Ahy20g1141 785 ProSiteProfiles Zinc finger SWIM-type profile. 592 628 IPR007527 GO:0008270
Ahy20g1141 785 MobiDBLite consensus disorder prediction 32 55 - -
Ahy20g1141 785 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 745 IPR031052 GO:0006355
Ahy20g1141 785 SMART 26again6 603 630 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1141 Ahy-Chr20 19234270 19236627 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1141 MULE 2.10E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1141 - - ahf:112803395 1013.83