Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1137 ATGGGTTTCATAGTGTTGTTTTTGCTATTGGCTACACTATGTTCTTCAGAGCTTGAAAATAATTCACAAGAGGAAGCCCTATATGCATTGAAGTTATCATTGAATGCTTCAAAAAATCAGCTTACTAACTGGAATAGAGACCAAGTTAGCCCGTGCACTTGGTCTAATGTTTACTGTGACCCAAGTGGCAATATTTATCAAGTTTCACTAGCATTTATGGGATTTACAGGATACTTGACACCAAGAATAGGAGCATTAAAAGGTCTTCAAACTCTTGTTCTAAATGGGAATGGCATCACTGGAGGTATACCAAAAGAATTAGGAAACCTTACAAGATTAGTCAGATTGGATCTGCAAAACAACAGATTAACCGGTGAAATACCCTCTTCCCTTGGTAACCTTAAAAAGCTTCAGTTCTTAACATTGAGTCAAAACAACCTCAACGGATCTATTCCTGAATCATTAGCCAATCTTCCAAGCCTGATCAATGTTCTTCTAGATTCAAATGATCTCAGTGGTCAGATTCCAGAAGGCTTATTCAATGTTTCTAAATACAAGTATGTATGTTTCACTGGAAATAAGTTGAACTGTGGCATGAATTATCGTAAACTTTGTGCATATGATATTGCAGACCAAGCAGGTTCATCGCATAAACCGAAAACTGGCATCATTGTTGGAATAGTTTTAGGTTTGGTTGTTATTATTTGTCTTGGTGGTCTACTGTTCTTCTGGCGCAAGAGCTACAAGCGTGATGTTTACGTAGATGTTGCAGGTGAAGTTGATGGGCGAATTGCATTTGGTCAGCTGAAAAGATTTGCTTGGAGAGAACTGCAAATAGCTACAGACAACTTTAGTGAGAGAAATGTTTTAGGACAGGGAGGCTTTGGGAAGGTTTATAAAGGTGTTCTACCCGATGGCACAAAAATTGCTGTTAAAAGGTTAACCGATTATGAAAGTCCCGGTGGAGATGCTGCTTTCCAGCGTGAAGTTGAGATGATAAGTGTAGCTGTCCATAGGAACTTGTTACGGCTGATTGGGTTCTGTACGACTCCAACGGAGCGCCTATTAGTCTATCCCTTCATGCAGAACCTAAGTGTTGCCTATCGTCTTCGAGAACTTAAACCTGGGGAGGCTGTTTTGGATTGGCCTACGAGAAAAAAAGTGGCTCTGGGAACAGCCCGAGGCCTAGAATATCTTCATGAGCAATGCAATCCTAAGATTATCCATCGGGATGTGAAGGCAGCTAATGTATTACTGGATGGAGACTTCGAGGCAGTTGTAGGAGACTTCGGTTTAGCAAAGTTAGTTGACGTTCGAAGGACTAATGTGACAACTCAAGTTCGTGGGACCATGGGCCACATAGCTCCTGAATACTTGTCCACTGGAAAATCTTCAGAAAAGACTGATGTCTTCGGATATGGAATAATGCTTCTAGAGCTTGTTACAGGTCAACGCGCAATTGACTTTTCACGTTTGGAAGAGGAAGACGATGTGCTGTTGCTTGACCATGTTAAGAAACTTGAACGGGAGAAAAGACTAGATGCTATTGTTGATCGCAATCTGAAACAAAATTACAAAATAGAAGAAGTTGAAATGATTGTTCAAGTTGCATTACTCTGCACACAAGCATCACCAGAGGACCGACCAGCAATGTCGGAGGTCGTGAGAATGTTGGACGGAGAAGGACTGGCCGAAAGGTGGGAGGAATGGCAACACGTAGAGGTCAACCGGAGGCAGGATTACGAGAGACTGCAAAGAAGATTGGGGTGGGGAGAAGATTCAATAAATAACCAAGATGCCATTGAGTTGTCTGGTGGAAGATGA 1824 0.4172 MGFIVLFLLLATLCSSELENNSQEEALYALKLSLNASKNQLTNWNRDQVSPCTWSNVYCDPSGNIYQVSLAFMGFTGYLTPRIGALKGLQTLVLNGNGITGGIPKELGNLTRLVRLDLQNNRLTGEIPSSLGNLKKLQFLTLSQNNLNGSIPESLANLPSLINVLLDSNDLSGQIPEGLFNVSKYKYVCFTGNKLNCGMNYRKLCAYDIADQAGSSHKPKTGIIVGIVLGLVVIICLGGLLFFWRKSYKRDVYVDVAGEVDGRIAFGQLKRFAWRELQIATDNFSERNVLGQGGFGKVYKGVLPDGTKIAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELKPGEAVLDWPTRKKVALGTARGLEYLHEQCNPKIIHRDVKAANVLLDGDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLKQNYKIEEVEMIVQVALLCTQASPEDRPAMSEVVRMLDGEGLAERWEEWQHVEVNRRQDYERLQRRLGWGEDSINNQDAIELSGGR* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1137 607 ProSiteProfiles Protein kinase domain profile. 284 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1137 607 Gene3D Phosphorylase Kinase; domain 1 253 360 - -
Ahy20g1137 607 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Ahy20g1137 607 SMART serkin_6 284 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g1137 607 SUPERFAMILY L domain-like 21 197 - -
Ahy20g1137 607 SUPERFAMILY Protein kinase-like (PK-like) 266 558 IPR011009 -
Ahy20g1137 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Ahy20g1137 607 CDD TM_EGFR-like 219 250 - -
Ahy20g1137 607 Gene3D Ribonuclease Inhibitor 19 220 IPR032675 -
Ahy20g1137 607 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 607 - -
Ahy20g1137 607 Gene3D Transferase(Phosphotransferase) domain 1 361 578 - -
Ahy20g1137 607 Pfam Leucine rich repeat N-terminal domain 20 60 IPR013210 -
Ahy20g1137 607 PANTHER LRR RECEPTOR-LIKE KINASE 5 607 - -
Ahy20g1137 607 ProSitePatterns Protein kinases ATP-binding region signature. 290 312 IPR017441 GO:0005524
Ahy20g1137 607 Pfam Protein kinase domain 285 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1137 Ahy-Chr20 19100940 19107258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1137 1 607 Receptor kinase-like Gene Family AT5G10290 73.486 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Ahy20g1137 Pkinase 7.20E-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1137 - - gmx:100793416 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1137 20 19100940 19107258 Ahy10g0841 10 11986334 11992643 hybridization
Ahy20g1137 20 19100940 19107258 Ahy13g4429 13 144310332 144316265 PCT
Ahy20g1137 20 19100940 19107258 Ahy3g4154 3 141379617 141385525 PCT